RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 HMGB1P1B2RPK0 211 aaPredicted RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 F8VP50 259 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 HUS1O60921 280 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 KRT1P04264 644 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 MYZAPP0CAP1 466 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 RALAP11233 206 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 RARGP13631 454 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 GPD1P21695 349 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 WARSP23381 471 aaKnown RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 RFC1P35251 1148 aaPredicted RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 GNL1P36915 607 aaPredicted RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 HSD17B3P37058 310 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 ZNF143P52747 638 aaPredicted RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 SLC8A3P57103 927 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 DHX9Q08211 1270 aaKnown RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 HIC1Q14526 733 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 NBPF20Q3BBV1 942 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 BOLA3Q53S33 107 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 C2CD6Q53TS8 623 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TFDP3Q5H9I0 405 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 ZFYVE27Q5T4F4 411 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TWF2Q6IBS0 349 aaKnown RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 AADACL2Q6P093 401 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TTC27Q6P3X3 843 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 ZNF365Q70YC5 407 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TMC3Q7Z5M5 1100 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 SERINC5Q86VE9 423 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 MAP7D3Q8IWC1 876 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 ZDHHC14Q8IZN3 488 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 ARFGAP2Q8N6H7 521 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 ANKRD52Q8NB46 1076 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TRPV1Q8NER1 839 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 APPL2Q8NEU8 664 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 OR6B3Q8NGW1 331 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 SLITRK1Q96PX8 696 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 CPXM1Q96SM3 734 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TRIM51Q9BSJ1 452 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 CNPY3Q9BT09 278 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TXLNGYQ9BZA5 131 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 TRIM7Q9C029 511 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 NXF3Q9H4D5 531 aaKnown RBP10.94□□□□□ -0.66
VPS25-206ENST00000591584 UBN1Q9NPG3 1134 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 GIT1Q9Y2X7 761 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 SNX24Q9Y343 169 aa10.94□□□□□ -0.66
VPS25-206ENST00000591584 A8MXQ7 604 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 SMAPO00193 183 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 DPYSL4O14531 572 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 ZNF623O75123 536 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 NUDT17P0C025 328 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 RPL9P32969 192 aaKnown RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 PMS2P54278 862 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 BCAT1P54687 386 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 PLTPP55058 493 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 ZNF200P98182 395 aaPredicted RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 SLC6A3Q01959 620 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 SP3Q02447 781 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 DMTNQ08495 405 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 ARHGEF6Q15052 776 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 TRADDQ15628 312 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 TAZQ16635 292 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 CYP4A22Q5TCH4 519 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 AGBL2Q5U5Z8 902 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 OR6B2Q6IFH4 312 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 SPOCD1Q6ZMY3 1216 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 TRMT10CQ7L0Y3 403 aaKnown RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 MRPL10Q7Z7H8 261 aaKnown RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 HOOK3Q86VS8 718 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 FAM228AQ86W67 206 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 DDX42Q86XP3 938 aaKnown RBP eCLIP10.93□□□□□ -0.66
VPS25-206ENST00000591584 TMEM86AQ8N2M4 240 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 SMG8Q8ND04 991 aaKnown RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 KLHDC9Q8NEP7 349 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 CMASQ8NFW8 434 aaPredicted RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 SLC35F5Q8WV83 523 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 TMEM40Q8WWA1 233 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 PIK3R5Q8WYR1 880 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 TRIB2Q92519 343 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 SNF8Q96H20 258 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 TBCBQ99426 244 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 MRPL45Q9BRJ2 306 aaKnown RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 PABPC3Q9H361 631 aaKnown RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 FAM204AQ9H8W3 233 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 RSAD1Q9HA92 442 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 PRDM16Q9HAZ2 1276 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 TMBIM4Q9HC24 238 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.93□□□□□ -0.66
VPS25-206ENST00000591584 CYTH4Q9UIA0 394 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 PLAAQ9Y263 795 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 CDY2AQ9Y6F7 541 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 ANK1P16157 1881 aa10.93□□□□□ -0.66
VPS25-206ENST00000591584 hCG_1818297A0A087WSY0 165 aa10.92□□□□□ -0.66
VPS25-206ENST00000591584 TCRBV7S2A1N4TA0A589 114 aa10.92□□□□□ -0.66
VPS25-206ENST00000591584 FAM170AA1A519 330 aa10.92□□□□□ -0.66
VPS25-206ENST00000591584 ARHGEF37A1IGU5 675 aa10.92□□□□□ -0.66
VPS25-206ENST00000591584 C2CD4BA6NLJ0 364 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms