RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 LILRA4P59901 499 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 POU5F1Q01860 360 aaKnown RBP10.19□□□□□ -0.78
BRCA1-226ENST00000591534 TMEM132DQ14C87 1099 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 SPATA1Q5VX52 437 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 CEP68Q76N32 757 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 KCNK18Q7Z418 384 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 SENP8Q96LD8 212 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 ASB7Q9H672 318 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 TASP1Q9H6P5 420 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 SERTAD1Q9UHV2 236 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 MYH15Q9Y2K3 1946 aa10.19□□□□□ -0.78
BRCA1-226ENST00000591534 A0A0B4J269 797 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 MTMR11A4FU01 709 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SHISA7A6NL88 538 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SLC38A8A6NNN8 435 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SPECC1L-ADORA2AF8WAN1 911 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 ARNTLO00327 626 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 ADRB2P07550 413 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 OR4Q2P0C623 313 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 TDGF1P13385 188 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 DDX6P26196 483 aaKnown RBP eCLIP10.18□□□□□ -0.78
BRCA1-226ENST00000591534 GABRR2P28476 465 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 HOXA6P31267 233 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SATB1Q01826 763 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SPAG1Q07617 926 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SPEM2Q0P670 501 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 ENOX2Q16206 610 aaKnown RBP10.18□□□□□ -0.78
BRCA1-226ENST00000591534 CSRP2Q16527 193 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 ITPRIPL2Q3MIP1 535 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 MGAT5BQ3V5L5 792 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 TMEM119Q4V9L6 283 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 GPR158Q5T848 1215 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 BRAPQ7Z569 592 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 GPBP1Q86WP2 473 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 TMC8Q8IU68 726 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 DCP1BQ8IZD4 617 aaKnown RBP10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SPPL2BQ8TCT7 592 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 BPIFB1Q8TDL5 484 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 PNMA5Q96PV4 448 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 PLIN2Q99541 437 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 SEPT5Q99719 369 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-226ENST00000591534 LRRC3Q9BY71 257 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 ZHX3Q9H4I2 956 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 CFAP45Q9UL16 551 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 C2CD2Q9Y426 696 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 OTOGLQ3ZCN5 2332 aa10.18□□□□□ -0.78
BRCA1-226ENST00000591534 DNAH14Q0VDD8 3507 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 MIA3Q5JRA6 1907 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 CACNA1IQ9P0X4 2223 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 CHURC1-FNTBB4DL54 471 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 SLC30A4O14863 429 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 MEFVO15553 781 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-226ENST00000591534 CYP11A1P05108 521 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 LONP1P36776 959 aaKnown RBP10.17□□□□□ -0.78
BRCA1-226ENST00000591534 AVPR1AP37288 418 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 PNPLA4P41247 253 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 TNFSF9P41273 254 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 FNTBP49356 437 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 TAF6P49848 677 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 GDF10P55107 478 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 GRSF1Q12849 480 aaKnown RBP eCLIP10.17□□□□□ -0.78
BRCA1-226ENST00000591534 NNTQ13423 1086 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 POSTNQ15063 836 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 LPAL2Q16609 132 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 OCLNQ16625 522 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 SKOR2Q2VWA4 1001 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-226ENST00000591534 SLC39A12Q504Y0 691 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 C9orf57Q5W0N0 161 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 ADALQ6DHV7 355 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 JADE1Q6IE81 842 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 CC2D1AQ6P1N0 951 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-226ENST00000591534 CLEC17AQ6ZS10 378 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 NT5DC4Q86YG4 428 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 ATAD1Q8NBU5 361 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 CCDC26Q8TAB7 109 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 REEP2Q9BRK0 252 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 DNAJC25Q9H1X3 360 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 SEMA4GQ9NTN9 838 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 CPSF3Q9UKF6 684 aaKnown RBP10.17□□□□□ -0.78
BRCA1-226ENST00000591534 VWA8A3KMH1 1905 aa10.17□□□□□ -0.78
BRCA1-226ENST00000591534 MYH11P35749 1972 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 CCDC163A0A0D9SF12 145 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 NPHP3-ACAD11A0A0J9YXS1 232 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 J3QL48 77 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 PIRO00625 290 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 CYB561D2O14569 222 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 IL18RAPO95256 599 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ZSCAN22P10073 491 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-226ENST00000591534 TGM1P22735 817 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 DDIT3P35638 169 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 SERPINB4P48594 390 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 ZNF131P52739 623 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 GTF2BQ00403 316 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 TSPY1Q01534 308 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 GRIN1Q05586 938 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 BFSP1Q12934 665 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 CBLBQ13191 982 aa10.16□□□□□ -0.78
BRCA1-226ENST00000591534 DHX8Q14562 1220 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms