RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SLC2A4RGQ9NR83 387 aa19.47■□□□□ 0.71
DDX39A-212ENST00000590260 LMBRD1Q9NUN5 540 aa19.47■□□□□ 0.71
DDX39A-212ENST00000590260 NUP210Q8TEM1 1887 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-212ENST00000590260 ZNF318Q5VUA4 2279 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 SLC16A3O15427 465 aaKnown RBP19.46■□□□□ 0.71
DDX39A-212ENST00000590260 ECI2O75521 394 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 F11P03951 625 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 KRT13P13646 458 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 PTPN1P18031 435 aaKnown RBP19.46■□□□□ 0.71
DDX39A-212ENST00000590260 BDNFP23560 247 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 VIPR2P41587 438 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 PIK3CAP42336 1068 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 MAGEA11P43364 429 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 CYP4F8P98187 520 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 FKBP3Q00688 224 aaKnown RBP19.46■□□□□ 0.71
DDX39A-212ENST00000590260 CBWD6Q4V339 395 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 CBWD3Q5JTY5 395 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 CBWD5Q5RIA9 395 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 CWF19L1Q69YN2 538 aaKnown RBP19.46■□□□□ 0.71
DDX39A-212ENST00000590260 KLHL10Q6JEL2 608 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 PAQR9Q6ZVX9 377 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 MTSS1LQ765P7 747 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 SPATA2LQ8IUW3 424 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-212ENST00000590260 GPIHBP1Q8IV16 184 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 FBXL6Q8N531 539 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 FAM200AQ8TCP9 573 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 FUBP3Q96I24 572 aaKnown RBP eCLIP19.46■□□□□ 0.71
DDX39A-212ENST00000590260 LRRC3BQ96PB8 259 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 TWNKQ96RR1 684 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 B3GNT5Q9BYG0 378 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 SNX25Q9H3E2 840 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 TRPV4Q9HBA0 871 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 KIAA1468Q9P260 1216 aa19.46■□□□□ 0.71
DDX39A-212ENST00000590260 CLDN5O00501 218 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 NOL4O94818 638 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 EPB41P11171 864 aaKnown RBP19.45■□□□□ 0.7
DDX39A-212ENST00000590260 ORC1Q13415 861 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 VITQ6UXI7 678 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 ITIH5Q86UX2 942 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 ZSCAN18Q8TBC5 510 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-212ENST00000590260 NELFBQ8WX92 580 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 TAF4BQ92750 862 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 SLC35C1Q96A29 364 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 ELSPBP1Q96BH3 223 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 TSG101Q99816 390 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 GTPBP4Q9BZE4 634 aaKnown RBP19.45■□□□□ 0.7
DDX39A-212ENST00000590260 ZNF518BQ9C0D4 1074 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 ATXN3LQ9H3M9 355 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 CTNND2Q9UQB3 1225 aa19.45■□□□□ 0.7
DDX39A-212ENST00000590260 KIF26AQ9ULI4 1882 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-212ENST00000590260 SHISA7A6NL88 538 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 SLC38A8A6NNN8 435 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 A8MXQ7 604 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 PSMA7O14818 248 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 GTF2H1P32780 548 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 NLRP12P59046 1061 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 USP46P62068 366 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 NOP14P78316 857 aaKnown RBP19.44■□□□□ 0.7
DDX39A-212ENST00000590260 KRT39Q6A163 491 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 SCN4BQ8IWT1 228 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 SIX5Q8N196 739 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 B3GALNT2Q8NCR0 500 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 WHAMMQ8TF30 809 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 SMARCD2Q92925 531 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 MAGEC2Q9UBF1 373 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-212ENST00000590260 WNT16Q9UBV4 365 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 CA14Q9ULX7 337 aa19.44■□□□□ 0.7
DDX39A-212ENST00000590260 WDFY4Q6ZS81 3184 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 PI15O43692 258 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 PRAMEF12O95522 483 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 STX17P56962 302 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 RPL10AP62906 217 aaKnown RBP19.43■□□□□ 0.7
DDX39A-212ENST00000590260 CYP27A1Q02318 531 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 GRM2Q14416 872 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 VEPH1Q14D04 833 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 FOXR2Q6PJQ5 311 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 C4orf50Q6ZRC1 276 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 TMEM105Q8N8V8 129 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 MYRFLQ96LU7 910 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 IPO9Q96P70 1041 aaKnown RBP19.43■□□□□ 0.7
DDX39A-212ENST00000590260 SLC46A2Q9BY10 475 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 CLSTN2Q9H4D0 955 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 COQ4Q9Y3A0 265 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 ANAPC1Q9H1A4 1944 aa19.43■□□□□ 0.7
DDX39A-212ENST00000590260 CSH1P0DML2 217 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 CSH2P0DML3 217 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 MXI1P50539 228 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 NDST1P52848 882 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 INCA1Q0VD86 236 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 GPR158Q5T848 1215 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 VSTM1Q6UX27 236 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 FILIP1Q7Z7B0 1213 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 ACOT1Q86TX2 421 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 FUKQ8N0W3 1084 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 CRYBG2Q8N1P7 616 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 RIN3Q8TB24 985 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 TATDN2Q93075 761 aa19.42■□□□□ 0.7
DDX39A-212ENST00000590260 TRMT2BQ96GJ1 504 aaKnown RBP19.42■□□□□ 0.7
DDX39A-212ENST00000590260 MAGED2Q9UNF1 606 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-212ENST00000590260 F8VP50 259 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms