RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SMC3Q9UQE7 1217 aa19.82■□□□□ 0.76
CCDC43-204ENST00000588687 HCRTO43612 131 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 PRPF40AO75400 957 aaKnown RBP19.81■□□□□ 0.76
CCDC43-204ENST00000588687 AKAP3O75969 853 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 CSH1P0DML2 217 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 CSH2P0DML3 217 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 ACAT1P24752 427 aaKnown RBP19.81■□□□□ 0.76
CCDC43-204ENST00000588687 CYP2F1P24903 491 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 GJA4P35212 333 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 TSPY1Q01534 308 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 DDR2Q16832 855 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 L1TD1Q5T7N2 865 aaKnown RBP19.81■□□□□ 0.76
CCDC43-204ENST00000588687 LARP1BQ659C4 914 aaKnown RBP19.81■□□□□ 0.76
CCDC43-204ENST00000588687 CACNA2D4Q7Z3S7 1137 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 LRRC52Q8N7C0 313 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 SAAL1Q96ER3 474 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 ZC3H10Q96K80 434 aaKnown RBP19.81■□□□□ 0.76
CCDC43-204ENST00000588687 FAM213AQ9BRX8 229 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 OLFML3Q9NRN5 406 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 GDAP2Q9NXN4 497 aa19.81■□□□□ 0.76
CCDC43-204ENST00000588687 FRMD3A2A2Y4 597 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 GABRDO14764 452 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 AXIN1O15169 862 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 TFAMQ00059 246 aaKnown RBP19.8■□□□□ 0.76
CCDC43-204ENST00000588687 FAM160A1Q05DH4 1040 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 MTF1Q14872 753 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 POSTNQ15063 836 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 PDGFRLQ15198 375 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 CFAP221Q4G0U5 840 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 LIMS2Q7Z4I7 341 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 MRPS31Q92665 395 aaKnown RBP19.8■□□□□ 0.76
CCDC43-204ENST00000588687 DDX43Q9NXZ2 648 aaKnown RBP19.8■□□□□ 0.76
CCDC43-204ENST00000588687 MAGED2Q9UNF1 606 aaPredicted RBP19.8■□□□□ 0.76
CCDC43-204ENST00000588687 AGAP1Q9UPQ3 857 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 CLIC4Q9Y696 253 aa19.8■□□□□ 0.76
CCDC43-204ENST00000588687 PTPRJQ12913 1337 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 ATG13O75143 517 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 DRD1P21728 446 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 PMLP29590 882 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 GALK1P51570 392 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 PLK5Q496M5 336 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 AASDHQ4L235 1098 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-204ENST00000588687 TMEM86AQ8N2M4 240 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 CAMKK1Q8N5S9 505 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 SPATA18Q8TC71 538 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 OSCP1Q8WVF1 389 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 DDX1Q92499 740 aaKnown RBP19.79■□□□□ 0.76
CCDC43-204ENST00000588687 HHIPQ96QV1 700 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 P2RY13Q9BPV8 354 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 CBWD1Q9BRT8 395 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 SMOC1Q9H4F8 434 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 TMEM206Q9H813 350 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 ECT2Q9H8V3 914 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 MRPL44Q9H9J2 332 aaKnown RBP19.79■□□□□ 0.76
CCDC43-204ENST00000588687 RBAKQ9NYW8 714 aaPredicted RBP19.79■□□□□ 0.76
CCDC43-204ENST00000588687 TBC1D7Q9P0N9 293 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 GCNT4Q9P109 453 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 GTF3C4Q9UKN8 822 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 ITGA11Q9UKX5 1188 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 SLC8A2Q9UPR5 921 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 PCDHGA5Q9Y5G8 931 aa19.79■□□□□ 0.76
CCDC43-204ENST00000588687 GAP43P17677 238 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 GARTP22102 1010 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 MPLP40238 635 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 RPL10AP62906 217 aaKnown RBP19.78■□□□□ 0.76
CCDC43-204ENST00000588687 EML3Q32P44 896 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 SYT13Q7L8C5 426 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 ACCSQ96QU6 501 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 CYP2S1Q96SQ9 504 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 MTMR12Q9C0I1 747 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 DUSP15Q9H1R2 295 aaPredicted RBP19.78■□□□□ 0.76
CCDC43-204ENST00000588687 UXTQ9UBK9 157 aaPredicted RBP19.78■□□□□ 0.76
CCDC43-204ENST00000588687 WNT6Q9Y6F9 365 aa19.78■□□□□ 0.76
CCDC43-204ENST00000588687 NUP205Q92621 2012 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 A0A087X0B3 334 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 C2orf78A6NCI8 922 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 CCDC192P0DO97 292 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 TCF3P15923 654 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 ZXDBP98169 803 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 ST3GAL2Q16842 350 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 SOWAHAQ2M3V2 549 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 GAB4Q2WGN9 574 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 FBXO43Q4G163 708 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 FAM171BQ6P995 826 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 ADGRF2Q8IZF7 708 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 CPA6Q8N4T0 437 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 TOP6BLQ8N6T0 577 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 RPLP0P6Q8NHW5 317 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 KBTBD7Q8WVZ9 684 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 FUBP3Q96I24 572 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCDC43-204ENST00000588687 CLIC6Q96NY7 704 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 PDE11AQ9HCR9 933 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 EXOC7Q9UPT5 735 aa19.77■□□□□ 0.76
CCDC43-204ENST00000588687 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.77■□□□□ 0.76
CCDC43-204ENST00000588687 SRPRBQ9Y5M8 271 aaKnown RBP19.77■□□□□ 0.76
CCDC43-204ENST00000588687 GOLGA8IPA6NC78 632 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 GOLGA8JA6NMD2 632 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 HUS1O60921 280 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 GCNT3O95395 438 aa19.76■□□□□ 0.75
CCDC43-204ENST00000588687 CHRM1P11229 460 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms