RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 HESX1Q9UBX0 185 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 L1RE1Q9UN81 338 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 CHD9Q3L8U1 2897 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 ANKRD62A6NC57 917 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 C2CD2LO14523 706 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 KIF5CO60282 957 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 LPXNO60711 386 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 MYBL1P10243 752 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 CTSAP10619 480 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 FGFR3P22607 806 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 NSFP46459 744 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 FMO1Q01740 532 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 CYP27A1Q02318 531 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 SMC1AQ14683 1233 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 GRIN2CQ14957 1233 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 PTPN14Q15678 1187 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 RTP2Q5QGT7 225 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 ACAD10Q6JQN1 1059 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 CRYBG2Q8N1P7 616 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 SLC4A11Q8NBS3 891 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 MICAL1Q8TDZ2 1067 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 SLC20A1Q8WUM9 679 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 RIN2Q8WYP3 895 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 DDX1Q92499 740 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 VCPIP1Q96JH7 1222 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 PPP1R13BQ96KQ4 1090 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 MRPL45Q9BRJ2 306 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 ELOVL4Q9GZR5 314 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 LHX5Q9H2C1 402 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 MRPL17Q9NRX2 175 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 DDX43Q9NXZ2 648 aaKnown RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 MYO1AQ9UBC5 1043 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 CDH9Q9ULB4 789 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 SSX2IPQ9Y2D8 614 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 TIMM13Q9Y5L4 95 aaPredicted RBP14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 TSC2P49815 1807 aa14.77□□□□□ -0.05
CSNK1D-209ENST00000578904 CHD7Q9P2D1 2997 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 GABRDO14764 452 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 FSCN2O14926 492 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 PJA2O43164 708 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 CHRNB2P17787 502 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 BRD2P25440 801 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 ERVFC1P60507 584 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 TSPY1Q01534 308 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 DSG1Q02413 1049 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 YWHAHQ04917 246 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 PSMD5Q16401 504 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 CLEC16AQ2KHT3 1053 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 VARS2Q5ST30 1063 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 LIN9Q5TKA1 542 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 WSCD1Q658N2 575 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 OVOS1Q6IE37 1185 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 ANKS3Q6ZW76 656 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 RNF10Q8N5U6 811 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 LNX1Q8TBB1 728 aaPredicted RBP14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 AUTS2Q8WXX7 1259 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 PIK3R5Q8WYR1 880 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 ACBD6Q9BR61 282 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 ISCUQ9H1K1 167 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 NGRNQ9NPE2 291 aaKnown RBP14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 CHST7Q9NS84 486 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 VWA8A3KMH1 1905 aa14.76□□□□□ -0.05
CSNK1D-209ENST00000578904 BTNL10A8MVZ5 291 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 H7C4K7 107 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 CXCL14O95715 111 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 FTLP02792 175 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 CYP1A1P04798 512 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 CALB1P05937 261 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 PDGFRBP09619 1106 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 TMEM253P0C7T8 217 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 IRS1P35568 1242 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 NAP1L1P55209 391 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 CREMQ03060 361 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 CAMK1Q14012 370 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 ARHGAP17Q68EM7 881 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 PDE12Q6L8Q7 609 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 ZNF280DQ6N043 979 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 PRSS55Q6UWB4 352 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 LCLAT1Q6UWP7 414 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 Q7L0L9 218 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 ACOT1Q86TX2 421 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 REXO1L1PQ8IX06 675 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 RHOT2Q8IXI1 618 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 B3GALNT2Q8NCR0 500 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 KBTBD7Q8WVZ9 684 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 MRPL38Q96DV4 380 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 ALS2CR12Q96Q35 445 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 GAS2L1Q99501 681 aaPredicted RBP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 LZTFL1Q9NQ48 299 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 STRIP2Q9ULQ0 834 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 PCDHGC5Q9Y5F6 944 aa14.75□□□□□ -0.05
CSNK1D-209ENST00000578904 A0A0A6YYK5 440 aaPredicted RBP14.74□□□□□ -0.05
CSNK1D-209ENST00000578904 TMCO5BA8MYB1 307 aa14.74□□□□□ -0.05
CSNK1D-209ENST00000578904 ZNF263O14978 683 aa14.74□□□□□ -0.05
CSNK1D-209ENST00000578904 PTPN1P18031 435 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms