RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 KBTBD7Q8WVZ9 684 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 RSPRY1Q96DX4 576 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 VPS13AQ96RL7 3174 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 ZFHX2Q9C0A1 2572 aaPredicted RBP10.71□□□□□ -0.69
RPA1-206ENST00000573994 SCAND2PQ9GZW5 306 aaPredicted RBP10.71□□□□□ -0.69
RPA1-206ENST00000573994 ATXN3LQ9H3M9 355 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 HEBP1Q9NRV9 189 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 GDAP2Q9NXN4 497 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 CGNQ9P2M7 1197 aaKnown RBP10.71□□□□□ -0.69
RPA1-206ENST00000573994 ASB3Q9Y575 518 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 PCDHB5Q9Y5E4 795 aa10.71□□□□□ -0.69
RPA1-206ENST00000573994 HEPACAM2A8MVW5 462 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 PRPF40AO75400 957 aaKnown RBP10.7□□□□□ -0.7
RPA1-206ENST00000573994 PRAMEF12O95522 483 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 GLULP15104 373 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 CYP2F1P24903 491 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 GDI1P31150 447 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 ANGPT1Q15389 498 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 TAF12Q16514 161 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 DDR2Q16832 855 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 ARHGAP15Q53QZ3 475 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 C12orf56Q8IXR9 622 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 GOLGA5Q8TBA6 731 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 SPATA18Q8TC71 538 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 ELMO3Q96BJ8 720 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 GCNAQ96QF7 691 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 MMS19Q96T76 1030 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 PKMYT1Q99640 499 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 SYT15Q9BQS2 421 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 ACBD6Q9BR61 282 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 TRMT61BQ9BVS5 477 aaKnown RBP10.7□□□□□ -0.7
RPA1-206ENST00000573994 SMG9Q9H0W8 520 aaKnown RBP10.7□□□□□ -0.7
RPA1-206ENST00000573994 BRD9Q9H8M2 597 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 GTF3C4Q9UKN8 822 aa10.7□□□□□ -0.7
RPA1-206ENST00000573994 MAGED2Q9UNF1 606 aaPredicted RBP10.7□□□□□ -0.7
RPA1-206ENST00000573994 MTF2Q9Y483 593 aaPredicted RBP10.7□□□□□ -0.7
RPA1-206ENST00000573994 FAM237AA0A1B0GTK4 181 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 A0A1W2PQ27 194 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 A0A1W2PQ64 194 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 A0A1W2PQD8 194 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 KANSL1LA0AUZ9 987 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 MYBPHLA2RUH7 354 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 LRRIQ3A6PVS8 624 aaPredicted RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 ATP2C2O75185 946 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 FGF19O95750 216 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 NR3C1P04150 777 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 PDGFRBP09619 1106 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 LMO2P25791 158 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 TARSP26639 723 aaKnown RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 PCSK1P29120 753 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 CDC25CP30307 473 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 LHX1P48742 406 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 STARD6P59095 220 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 MYL6P60660 151 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 TNNC1P63316 161 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 PRKCQQ04759 706 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 PSMD2Q13200 908 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 BIRC3Q13489 604 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 TRPC3Q13507 836 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 NFE2Q16621 373 aaPredicted RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 TDRD10Q5VZ19 366 aaKnown RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 SCARA5Q6ZMJ2 495 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 KRBA2Q6ZNG9 492 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 FRMD5Q7Z6J6 570 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 SCN4BQ8IWT1 228 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 ZNF516Q92618 1163 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 MYLPFQ96A32 169 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 SHDQ96IW2 340 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 MRPL45Q9BRJ2 306 aaKnown RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 DDX23Q9BUQ8 820 aaKnown RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 GPR88Q9GZN0 384 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 KCTD10Q9H3F6 313 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 SMYD3Q9H7B4 428 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 TRPV4Q9HBA0 871 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 LTB4R2Q9NPC1 389 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 CRTAC1Q9NQ79 661 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 DLGAP2Q9P1A6 1054 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 NXF1Q9UBU9 619 aaKnown RBP10.69□□□□□ -0.7
RPA1-206ENST00000573994 MAPK8IP1Q9UQF2 711 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 SIT1Q9Y3P8 196 aa10.69□□□□□ -0.7
RPA1-206ENST00000573994 FAM170BA6NMN3 283 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 GABRDO14764 452 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 PHACTR2O75167 634 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 CST3P01034 146 aaPredicted RBP10.68□□□□□ -0.7
RPA1-206ENST00000573994 HMGA1P17096 107 aaKnown RBP10.68□□□□□ -0.7
RPA1-206ENST00000573994 PSMC3P17980 439 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 WARSP23381 471 aaKnown RBP10.68□□□□□ -0.7
RPA1-206ENST00000573994 RAP1GAPP47736 663 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 DPYDQ12882 1025 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 MDH1BQ5I0G3 518 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
RPA1-206ENST00000573994 CEP135Q66GS9 1140 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 DPH6Q7L8W6 267 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 LIMS2Q7Z4I7 341 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 TMEM150AQ86TG1 271 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 ARID3BQ8IVW6 561 aaPredicted RBP10.68□□□□□ -0.7
RPA1-206ENST00000573994 YAF2Q8IY57 180 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms