RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MEN1O00255 615 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 TRAF5O00463 557 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 WNT10BO00744 389 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PSMA7O14818 248 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 DAPK3O43293 454 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 AP1G1O43747 822 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 EDIL3O43854 480 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PRPSAP2O60256 369 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ENTPD3O75355 529 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ULK1O75385 1050 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 DNAJC8O75937 253 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 SGPL1O95470 568 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 TTLL1O95922 423 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 CFBP00751 764 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 SERPINC1P01008 464 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 AVPP01185 164 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 GH2P01242 217 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PF4P02776 101 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ADRB2P07550 413 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 SNHG28P0DPA3 235 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PFKFB1P16118 471 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 YBX3P16989 372 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMG6-208ENST00000570874 AKAP5P24588 427 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 CASP1P29466 404 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 HOXA11P31270 313 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 CSTF2P33240 577 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMG6-208ENST00000570874 CA8P35219 290 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 IRS1P35568 1242 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 TECP42680 631 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ABCG1P45844 678 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ID4P47928 161 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ZNF165P49910 485 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 GMPSP49915 693 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 ARF3P61204 181 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 ARF1P84077 181 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 CD83Q01151 205 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 TYRO3Q06418 890 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ZNF543Q08ER8 600 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 BNIP1Q12981 228 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 USP4Q13107 963 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 SLC14A1Q13336 389 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 KLF1Q13351 362 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 SEMA5AQ13591 1074 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 CUL2Q13617 745 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 FRG1Q14331 258 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 LBRQ14739 615 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 SLC39A14Q15043 492 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PCBP2Q15366 365 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMG6-208ENST00000570874 DLGAP5Q15398 846 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 UBE2SQ16763 222 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ZNF674Q2M3X9 581 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 C2orf76Q3KRA6 126 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 CERKLQ49MI3 558 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 XKR9Q5GH70 373 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 RPS26P11Q5JNZ5 115 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 PRAMEF18Q5VWM3 479 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ADALQ6DHV7 355 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 SHQ1Q6PI26 577 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 CORO6Q6QEF8 472 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 LYPD8Q6UX82 237 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ZNF783Q6ZMS7 281 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 RBM43Q6ZSC3 357 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 RAB11FIP2Q7L804 512 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 HEATR3Q7Z4Q2 680 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 LRRTM4Q86VH4 590 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 RETREG3Q86VR2 466 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PTRH1Q86Y79 214 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 GALNT12Q8IXK2 581 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 GRAMD1CQ8IYS0 662 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 FMR1NBQ8N0W7 255 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 TMEM151AQ8N4L1 468 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 C19orf47Q8N9M1 422 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 C1orf162Q8NEQ5 155 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 ETNPPLQ8TBG4 499 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ACER1Q8TDN7 264 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 ADAMTS15Q8TE58 950 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 MRPS27Q92552 414 aaKnown RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 WASF1Q92558 559 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 EXOC4Q96A65 974 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 KIAA1191Q96A73 305 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 DHX58Q96C10 678 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 TUBGCP3Q96CW5 907 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 ARL5BQ96KC2 179 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 CCDC74BQ96LY2 380 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 FNBP1Q96RU3 617 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 MRIQ9BWK5 157 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 BCO2Q9BYV7 579 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 FHDC1Q9C0D6 1143 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 WNT5BQ9H1J7 359 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 EPN3Q9H201 632 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 EHD4Q9H223 541 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 TMEM60Q9H2L4 133 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 FOXP1Q9H334 677 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 EHD1Q9H4M9 534 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 C8orf33Q9H7E9 229 aaPredicted RBP3.77□□□□□ -1.81
SMG6-208ENST00000570874 PARVGQ9HBI0 331 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 CRLF2Q9HC73 371 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PDE11AQ9HCR9 933 aa3.77□□□□□ -1.81
SMG6-208ENST00000570874 PDE7BQ9NP56 450 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms