RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 CCL26Q9Y258 94 aa12.9□□□□□ -0.34
VPS9D1-207ENST00000568691 THADAQ6YHU6 1953 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 HECTD1Q9ULT8 2610 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 H7C4K7 107 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 PLCG1P19174 1290 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 MUTP22033 750 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 PTGER3P43115 390 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 DGKEP52429 567 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 PLCB2Q00722 1185 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 AMPD3Q01432 767 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 DPYDQ12882 1025 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 DUSP4Q13115 394 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 RUNX3Q13761 415 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 TMEM119Q4V9L6 283 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 CCNI2Q6ZMN8 369 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 HAUS6Q7Z4H7 955 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 DNAJB7Q7Z6W7 309 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 OLIG1Q8TAK6 271 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 DDX12PQ92771 950 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 PAGE5Q96GU1 130 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 CDK5RAP3Q96JB5 506 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 FNBP1Q96RU3 617 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 MMTAG2Q9BU76 263 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 SLC32A1Q9H598 525 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 SLC27A5Q9Y2P5 690 aa12.89□□□□□ -0.35
VPS9D1-207ENST00000568691 KIAA1549LQ6ZVL6 1849 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 DPYSL4O14531 572 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 CD59P13987 128 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 GABRR2P28476 465 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 DHPSP49366 369 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 ZNF280DQ6N043 979 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 TMEM150AQ86TG1 271 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 MLKLQ8NB16 471 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 OR2I1PQ8NGU4 316 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 SNX29Q8TEQ0 813 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 PSMG2Q969U7 264 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 CAMK1GQ96NX5 476 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 URB1O60287 2271 aaKnown RBP12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 PTPRDP23468 1912 aa12.88□□□□□ -0.35
VPS9D1-207ENST00000568691 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 PP2D1A8MPX8 630 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 H0Y626 953 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 IKBKBO14920 756 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 TRIM16O95361 564 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 CPB1P15086 417 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 MORC3Q14149 939 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 KCNB1Q14721 858 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 DPCR1Q3MIW9 517 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 DCAF4L1Q3SXM0 396 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 C11orf57Q6ZUT1 292 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 ATAD1Q8NBU5 361 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 RLN3Q8WXF3 142 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 USP13Q92995 863 aaPredicted RBP12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 CCDC86Q9H6F5 360 aaKnown RBP12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 TASP1Q9H6P5 420 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 ATXN2Q99700 1313 aaKnown RBP12.87□□□□□ -0.35
VPS9D1-207ENST00000568691 MTMR11A4FU01 709 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 GOLGA6L19H0YKK7 550 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 ABLIM1O14639 778 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 OAZ2O95190 189 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 SPATA31C1P0DKV0 1188 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 PLA2G2AP14555 144 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 KCNE1P15382 129 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 DRD1P21728 446 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 RPA1P27694 616 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 GJA4P35212 333 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 PPP1R2P41236 205 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 CDR1P51861 262 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 LMAN2Q12907 356 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 IQCB1Q15051 598 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 MAPK6Q16659 721 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 ZNF423Q2M1K9 1284 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 PEAR1Q5VY43 1037 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 SLC23A3Q6PIS1 610 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 ADAMTS14Q8WXS8 1223 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 LARP4BQ92615 738 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 CCDC47Q96A33 483 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 PDLIM2Q96JY6 352 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 P2RY13Q9BPV8 354 aa12.86□□□□□ -0.35
VPS9D1-207ENST00000568691 C7orf25Q9BPX7 421 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms