RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 LMNAP02545 664 aaKnown RBP13.81□□□□□ -0.2
TSC2-220ENST00000568238 ACAT1P24752 427 aaKnown RBP13.81□□□□□ -0.2
TSC2-220ENST00000568238 SNRNP35Q16560 246 aaKnown RBP13.81□□□□□ -0.2
TSC2-220ENST00000568238 DUOXA2Q1HG44 320 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 BMT2Q1RMZ1 405 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 ZNF528Q3MIS6 628 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 SCARA3Q6AZY7 606 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 HS2ST1Q7LGA3 356 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 OSTM1Q86WC4 334 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 ADSSL1Q8N142 457 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 OR5B17Q8NGF7 314 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 CSGALNACT1Q8TDX6 532 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 MSANTD3Q96H12 275 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 PI4K2AQ9BTU6 479 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 TASP1Q9H6P5 420 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 IL21Q9HBE4 155 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 ZMYM5Q9UJ78 669 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 FBXO4Q9UKT5 387 aa13.81□□□□□ -0.2
TSC2-220ENST00000568238 HELZP42694 1942 aaKnown RBP13.8□□□□□ -0.2
TSC2-220ENST00000568238 TGFB1I1O43294 461 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 PRAMEF12O95522 483 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 DLATP10515 647 aaKnown RBP13.8□□□□□ -0.2
TSC2-220ENST00000568238 PCSK1P29120 753 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 WEE1P30291 646 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 LHX1P48742 406 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 CYP2J2P51589 502 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 MLLT6P55198 1093 aaPredicted RBP13.8□□□□□ -0.2
TSC2-220ENST00000568238 SNRPFP62306 86 aaKnown RBP13.8□□□□□ -0.2
TSC2-220ENST00000568238 KNOP1Q1ED39 458 aaKnown RBP13.8□□□□□ -0.2
TSC2-220ENST00000568238 ARHGAP29Q52LW3 1261 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 ZNF658Q5TYW1 1059 aaPredicted RBP13.8□□□□□ -0.2
TSC2-220ENST00000568238 C1orf228Q6PIY5 440 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 FAM3CQ92520 227 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 HPDLQ96IR7 371 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 FNBP1Q96RU3 617 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 OBP2AQ9NY56 170 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 ANAPC1Q9H1A4 1944 aa13.8□□□□□ -0.2
TSC2-220ENST00000568238 GPR179Q6PRD1 2367 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 GABRDO14764 452 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 CLIC2O15247 247 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 KIF20AO95235 890 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 CSH1P0DML2 217 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 CSH2P0DML3 217 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 HMGA1P17096 107 aaKnown RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 TNNI1P19237 187 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 PTMSP20962 102 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 DDX6P26196 483 aaKnown RBP eCLIP13.79□□□□□ -0.2
TSC2-220ENST00000568238 GPR15P49685 360 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 KPNA1P52294 538 aaPredicted RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 NLRP12P59046 1061 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 RPL10AP62906 217 aaKnown RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 CSTF1Q05048 431 aaKnown RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 CYP24A1Q07973 514 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 FZD5Q13467 585 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 MORC3Q14149 939 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 CCDC183Q5T5S1 534 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 CAVIN1Q6NZI2 390 aaKnown RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 ZNF687Q8N1G0 1237 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 XXYLT1Q8NBI6 393 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 RDH13Q8NBN7 331 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 LRRC3BQ96PB8 259 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 PKMYT1Q99640 499 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 IER2Q9BTL4 223 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 CHRDQ9H2X0 955 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 PRMT8Q9NR22 394 aaPredicted RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 CGNQ9P2M7 1197 aaKnown RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 GTF3C4Q9UKN8 822 aa13.79□□□□□ -0.2
TSC2-220ENST00000568238 MAGED2Q9UNF1 606 aaPredicted RBP13.79□□□□□ -0.2
TSC2-220ENST00000568238 HCRTO43612 131 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 BMP6P22004 513 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 CCNE1P24864 410 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 CYP2F1P24903 491 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 AVPR1AP37288 418 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 PRCPP42785 496 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 MTAPQ13126 283 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 PSMD6Q15008 389 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 CCDC142Q17RM4 750 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 DPH6Q7L8W6 267 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 TRAPPC11Q7Z392 1133 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 C12orf56Q8IXR9 622 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 CMTM8Q8IZV2 173 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
TSC2-220ENST00000568238 CELF5Q8N6W0 485 aaKnown RBP13.78□□□□□ -0.2
TSC2-220ENST00000568238 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 GOLGA5Q8TBA6 731 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 KBTBD7Q8WVZ9 684 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 CCDC127Q96BQ5 260 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms