RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 INTS8Q75QN2 995 aaKnown RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 CACNA2D4Q7Z3S7 1137 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM139Q8IV31 216 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 C17orf53Q8N3J3 647 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 C19orf47Q8N9M1 422 aaKnown RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 OR6J1Q8NGC5 347 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 PIWIL2Q8TC59 973 aaKnown RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 PSPC1Q8WXF1 523 aaKnown RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SOCS4Q8WXH5 440 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 KCNN1Q92952 543 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 MISP3Q96FF7 219 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 BICD1Q96G01 975 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 HRASLS5Q96KN8 279 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 DNAJC7Q99615 494 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 IKZF4Q9H2S9 585 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 RNPEPQ9H4A4 650 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 KIAA1586Q9HCI6 787 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 FAM207AQ9NSI2 230 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 ABHD10Q9NUJ1 306 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 AGPAT5Q9NUQ2 364 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 HSPBP1Q9NZL4 362 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SUCLA2Q9P2R7 463 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SUCOQ9UBS9 1254 aaKnown RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 ZHX1Q9UKY1 873 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SLC5A6Q9Y289 635 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 Q9Y3F1 56 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 SNX11Q9Y5W9 270 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 EMSYQ7Z589 1322 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 CEP350Q5VT06 3117 aa6.66□□□□□ -1.34
CAPN3-218ENST00000568153 GTPBP10A4D1E9 387 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 GOLGA6L9A6NEM1 432 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 RRN3P2A6NIE6 340 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 LRRIQ4A6NIV6 560 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 C9IYK1 514 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 H3BS24 57 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 KIF2AO00139 706 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 KIAA0391O15091 583 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 SMAD7O15105 426 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 ADCY3O60266 1144 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 N4BP1O75113 896 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 LDHAP00338 332 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 LGALS2P05162 132 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 INSRRP14616 1297 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 YY1P25490 414 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 KLRC1P26715 233 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 PON1P27169 355 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 TMOD1P28289 359 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 HNRNPH3P31942 346 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CD96P40200 585 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 PSMC4P43686 418 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 KLK7P49862 253 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 LIG4P49917 911 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 VAMP7P51809 220 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 RNF4P78317 190 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CDK17Q00537 523 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CDC42EP1Q00587 391 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 PRKCQQ04759 706 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 POU5F1BQ06416 359 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 LAMTOR4Q0VGL1 99 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 TFDP1Q14186 410 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 KIF22Q14807 665 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 PPP2R5EQ16537 467 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 DCAF17Q5H9S7 520 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 GJC2Q5T442 439 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 TDRD10Q5VZ19 366 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CYP4F22Q6NT55 531 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CBLL1Q75N03 491 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 RRAGAQ7L523 313 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 USP37Q86T82 979 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 TP53INP2Q8IXH6 220 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CCDC170Q8IYT3 715 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 METTL13Q8N6R0 699 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 POMGNT1Q8WZA1 660 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 SYN2Q92777 582 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 SLC35C1Q96A29 364 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 DHRS1Q96LJ7 313 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 C16orf70Q9BSU1 422 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CRACR2AQ9BSW2 395 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 LSM14BQ9BX40 385 aaKnown RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 TTYH3Q9C0H2 523 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 AP5M1Q9H0R1 490 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 C2orf40Q9H1Z8 148 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 PLCB1Q9NQ66 1216 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 FLRT1Q9NZU1 646 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 CEP72Q9P209 647 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 ARHGAP28Q9P2N2 729 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 ZNF215Q9UL58 517 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 PPP2R2CQ9Y2T4 447 aa6.65□□□□□ -1.34
CAPN3-218ENST00000568153 EPN1Q9Y6I3 576 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-218ENST00000568153 PHLPP2Q6ZVD8 1323 aa6.65□□□□□ -1.35
CAPN3-218ENST00000568153 LOC285556D6RIA3 1793 aa6.64□□□□□ -1.35
CAPN3-218ENST00000568153 GOLGA8IPA6NC78 632 aa6.64□□□□□ -1.35
CAPN3-218ENST00000568153 ZNF233A6NK53 670 aa6.64□□□□□ -1.35
CAPN3-218ENST00000568153 GOLGA8JA6NMD2 632 aa6.64□□□□□ -1.35
CAPN3-218ENST00000568153 TISP43B9A030 160 aa6.64□□□□□ -1.35
CAPN3-218ENST00000568153 HNRNPDLO14979 420 aaKnown RBP6.64□□□□□ -1.35
CAPN3-218ENST00000568153 PMM2O15305 246 aa6.64□□□□□ -1.35
CAPN3-218ENST00000568153 P4HA2O15460 535 aa6.64□□□□□ -1.35
CAPN3-218ENST00000568153 EXTL3O43909 919 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms