RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ELMO3Q96BJ8 720 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 EEF2KMTQ96G04 330 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 LRRC3BQ96PB8 259 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 SYT15Q9BQS2 421 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 SLITRK6Q9H5Y7 841 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 DLGAP2Q9P1A6 1054 aa26.91■■□□□ 1.9
FANCA-228ENST00000567943 F5P12259 2224 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 TACC1O75410 805 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 CLSTN1O94985 981 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 PDGFRBP09619 1106 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 KRT13P13646 458 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 GLULP15104 373 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 CYP4F8P98187 520 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 PFKPQ01813 784 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 NCOA4Q13772 614 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 CFAP221Q4G0U5 840 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 INTS8Q75QN2 995 aaKnown RBP26.9■■□□□ 1.9
FANCA-228ENST00000567943 ARID3BQ8IVW6 561 aaPredicted RBP26.9■■□□□ 1.9
FANCA-228ENST00000567943 CCDC105Q8IYK2 499 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 ADSSL1Q8N142 457 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 TSG101Q99816 390 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 NXF1Q9UBU9 619 aaKnown RBP26.9■■□□□ 1.9
FANCA-228ENST00000567943 CDH9Q9ULB4 789 aa26.9■■□□□ 1.9
FANCA-228ENST00000567943 ANAPC1Q9H1A4 1944 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 HEPACAM2A8MVW5 462 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 IKBKBO14920 756 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 CETN3O15182 167 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 LRRN2O75325 713 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 FGF19O95750 216 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 F11P03951 625 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 DCNP07585 359 aaKnown RBP26.89■■□□□ 1.9
FANCA-228ENST00000567943 PSMC3P17980 439 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 ZNF699Q32M78 642 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 ZACNQ401N2 412 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 GPR158Q5T848 1215 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 SV2AQ7L0J3 742 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 DTWD2Q8NBA8 298 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 TRMT61BQ9BVS5 477 aaKnown RBP26.89■■□□□ 1.9
FANCA-228ENST00000567943 VRTNQ9H8Y1 702 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 HEBP1Q9NRV9 189 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 FAM86C1Q9NVL1 165 aa26.89■■□□□ 1.9
FANCA-228ENST00000567943 MTF2Q9Y483 593 aaPredicted RBP26.89■■□□□ 1.9
FANCA-228ENST00000567943 ZNF638Q14966 1978 aaKnown RBP26.88■■□□□ 1.89
FANCA-228ENST00000567943 TRIM49P0CI25 452 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 TRIM49CP0CI26 452 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 CD72P21854 359 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 PMS1P54277 932 aaKnown RBP26.88■■□□□ 1.89
FANCA-228ENST00000567943 NLRP12P59046 1061 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 PRKCQQ04759 706 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 ANKRD40Q6AI12 368 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 SPATA2LQ8IUW3 424 aaPredicted RBP26.88■■□□□ 1.89
FANCA-228ENST00000567943 MFSD6LQ8IWD5 586 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 PJA1Q8NG27 643 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 MYLPFQ96A32 169 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 FUBP3Q96I24 572 aaKnown RBP eCLIP26.88■■□□□ 1.89
FANCA-228ENST00000567943 SLC46A2Q9BY10 475 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 SNX25Q9H3E2 840 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 SIT1Q9Y3P8 196 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 CACNA1IQ9P0X4 2223 aa26.88■■□□□ 1.89
FANCA-228ENST00000567943 KANSL1LA0AUZ9 987 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 TRIM49BA6NDI0 452 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 ARNTLO00327 626 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 BIN1O00499 593 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 PRAMEF12O95522 483 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 GNL1P36915 607 aaPredicted RBP26.87■■□□□ 1.89
FANCA-228ENST00000567943 STIM1Q13586 685 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 DNASE1L2Q92874 299 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 SHDQ96IW2 340 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 DPEP3Q9H4B8 488 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 TASP1Q9H6P5 420 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 BRD9Q9H8M2 597 aa26.87■■□□□ 1.89
FANCA-228ENST00000567943 KIF26AQ9ULI4 1882 aaPredicted RBP26.87■■□□□ 1.89
FANCA-228ENST00000567943 PSMA7O14818 248 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 TADA3O75528 432 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 NOL4O94818 638 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 FAM163BP0C2L3 166 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 EPB41P11171 864 aaKnown RBP26.86■■□□□ 1.89
FANCA-228ENST00000567943 CD44P16070 742 aaKnown RBP26.86■■□□□ 1.89
FANCA-228ENST00000567943 CDC25CP30307 473 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 GDI1P31150 447 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 GCLMP48507 274 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 PPP3CAQ08209 521 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 TAF12Q16514 161 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 ZNF667Q5HYK9 610 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 OR6B3Q8NGW1 331 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 MYCBPAPQ8TBZ2 947 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 DEPDC1BQ8WUY9 529 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 PCED1BQ96HM7 432 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 SMYD3Q9H7B4 428 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 MMRN2Q9H8L6 949 aa26.86■■□□□ 1.89
FANCA-228ENST00000567943 SLC38A8A6NNN8 435 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 CSH1P0DML2 217 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 CSH2P0DML3 217 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 BMP6P22004 513 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 RFX1P22670 979 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 CCNE1P24864 410 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 WEE1P30291 646 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 PIK3CAP42336 1068 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 MAGEA11P43364 429 aa26.85■■□□□ 1.89
FANCA-228ENST00000567943 CDH8P55286 799 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms