RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 TRAPPC11Q7Z392 1133 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 DNAJB7Q7Z6W7 309 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 TMC8Q8IU68 726 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 SPATA2LQ8IUW3 424 aaPredicted RBP10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 TTC8Q8TAM2 541 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 SPPL2BQ8TCT7 592 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 PSMG2Q969U7 264 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 BORCS6Q96GS4 357 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 ASB16Q96NS5 453 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 SYT15Q9BQS2 421 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 SNX25Q9H3E2 840 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 MMRN2Q9H8L6 949 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 HEBP1Q9NRV9 189 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 NXF1Q9UBU9 619 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 USP25Q9UHP3 1055 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 GTF3C4Q9UKN8 822 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 NDRG2Q9UN36 371 aaKnown RBP10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 NCANO14594 1321 aa10.84□□□□□ -0.67
GTF3C1-206ENST00000566779 F5P12259 2224 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 HEPACAM2A8MVW5 462 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 ATP2C2O75185 946 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 MOSPD3O75425 235 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 NR3C1P04150 777 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 PCSK1P29120 753 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 RAP1GAPP47736 663 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 MYL6P60660 151 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 IFRD2Q12894 506 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 NFE2Q16621 373 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 DDR2Q16832 855 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 BMT2Q1RMZ1 405 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 SOWAHAQ2M3V2 549 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 SLC44A4Q53GD3 710 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 VITQ6UXI7 678 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 KRBA2Q6ZNG9 492 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 GAREM2Q75VX8 874 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 CCDC105Q8IYK2 499 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 TOP6BLQ8N6T0 577 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 DTWD2Q8NBA8 298 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 OR6B3Q8NGW1 331 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 GOLGA5Q8TBA6 731 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 C2orf15Q8WU43 125 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 MYLPFQ96A32 169 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 ELSPBP1Q96BH3 223 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 CCDC97Q96F63 343 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 SHDQ96IW2 340 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 TRMT61BQ9BVS5 477 aaKnown RBP10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 TRPC7Q9HCX4 862 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 AVENQ9NQS1 362 aaPredicted RBP10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 HPSEQ9Y251 543 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 SIT1Q9Y3P8 196 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 ASB3Q9Y575 518 aa10.83□□□□□ -0.68
GTF3C1-206ENST00000566779 MYBPHLA2RUH7 354 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 SLC38A8A6NNN8 435 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 ZNF263O14978 683 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 CALUO43852 315 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 ZNF202O95125 648 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 PRAMEF12O95522 483 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 PSMC3P17980 439 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 CDC25CP30307 473 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 LHX1P48742 406 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 EPHA5P54756 1037 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 PNOCQ13519 176 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 ANGPT1Q15389 498 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 ZNF699Q32M78 642 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 WDR72Q3MJ13 1102 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 MDH1BQ5I0G3 518 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 FRMD5Q7Z6J6 570 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 SMYD4Q8IYR2 804 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 PJA1Q8NG27 643 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 CXorf38Q8TB03 319 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 CSGALNACT1Q8TDX6 532 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 KBTBD7Q8WVZ9 684 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 ERCC4Q92889 916 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 CCDC34Q96HJ3 373 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 ZFYVE19Q96K21 471 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 ACBD6Q9BR61 282 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 MRPL45Q9BRJ2 306 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 SLC4A5Q9BY07 1137 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 LRRC3Q9BY71 257 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 SPATA6Q9NWH7 488 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 GDAP2Q9NXN4 497 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 FRMD4BQ9Y2L6 1034 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 MTF2Q9Y483 593 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 FANCMQ8IYD8 2048 aa10.82□□□□□ -0.68
GTF3C1-206ENST00000566779 PIEZO1Q92508 2521 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 A0A1W2PQ27 194 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 A0A1W2PQ64 194 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 A0A1W2PQD8 194 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 KANSL1LA0AUZ9 987 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 FAM170BA6NMN3 283 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 LRRIQ3A6PVS8 624 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 A8MXQ7 604 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 ARHGAP33O14559 1287 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 FGF19O95750 216 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 LMO2P25791 158 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 ANXA13P27216 316 aa10.81□□□□□ -0.68
GTF3C1-206ENST00000566779 AVPR1AP37288 418 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms