RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 HOOK1Q9UJC3 728 aaKnown RBP20.29■□□□□ 0.84
CPNE7-208ENST00000566398 NCANO14594 1321 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 DPYSL4O14531 572 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 ZNF263O14978 683 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 MAPK13O15264 365 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 AKAP3O75969 853 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 SMC2O95347 1197 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 C4BPAP04003 597 aaKnown RBP20.28■□□□□ 0.84
CPNE7-208ENST00000566398 DCNP07585 359 aaKnown RBP20.28■□□□□ 0.84
CPNE7-208ENST00000566398 NLRP12P59046 1061 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 CYP27A1Q02318 531 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 ZACNQ401N2 412 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 ZNF667Q5HYK9 610 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 MDH1BQ5I0G3 518 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 INTS8Q75QN2 995 aaKnown RBP20.28■□□□□ 0.84
CPNE7-208ENST00000566398 SMYD4Q8IYR2 804 aaPredicted RBP20.28■□□□□ 0.84
CPNE7-208ENST00000566398 STKLD1Q8NE28 680 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 MYCBPAPQ8TBZ2 947 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 ATOH1Q92858 354 aaPredicted RBP20.28■□□□□ 0.84
CPNE7-208ENST00000566398 RSPRY1Q96DX4 576 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 DDX23Q9BUQ8 820 aaKnown RBP20.28■□□□□ 0.84
CPNE7-208ENST00000566398 SMYD3Q9H7B4 428 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 HEBP1Q9NRV9 189 aa20.28■□□□□ 0.84
CPNE7-208ENST00000566398 UXTQ9UBK9 157 aaPredicted RBP20.28■□□□□ 0.84
CPNE7-208ENST00000566398 SLC38A8A6NNN8 435 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 A8MXQ7 604 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 IKBKBO14920 756 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 NOL4O94818 638 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 KRT13P13646 458 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 P4HA1P13674 534 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 DDX6P26196 483 aaKnown RBP eCLIP20.27■□□□□ 0.84
CPNE7-208ENST00000566398 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
CPNE7-208ENST00000566398 VAMP7P51809 220 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 UBXN2BQ14CS0 331 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 ZCWPW2Q504Y3 356 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 VSTM1Q6UX27 236 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 FAM186BQ8IYM0 893 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 MRPS31Q92665 395 aaKnown RBP20.27■□□□□ 0.84
CPNE7-208ENST00000566398 PCED1BQ96HM7 432 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 GSDMAQ96QA5 445 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 FAM86C1Q9NVL1 165 aa20.27■□□□□ 0.84
CPNE7-208ENST00000566398 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.84
CPNE7-208ENST00000566398 VNN1O95497 513 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 PRAMEF12O95522 483 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 BDNFP23560 247 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 WEE1P30291 646 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 PSMC2P35998 433 aaKnown RBP20.26■□□□□ 0.83
CPNE7-208ENST00000566398 PIK3CAP42336 1068 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 FCHO2Q0JRZ9 810 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 ADAM9Q13443 819 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 EDRF1Q3B7T1 1238 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 ZNF852Q6ZMS4 543 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 SV2AQ7L0J3 742 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 TMEM150AQ86TG1 271 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 GPIHBP1Q8IV16 184 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 SMARCE1Q969G3 411 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 TRMT2BQ96GJ1 504 aaKnown RBP20.26■□□□□ 0.83
CPNE7-208ENST00000566398 TIGD1Q96MW7 591 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 LTB4R2Q9NPC1 389 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 TRPV5Q9NQA5 729 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 OBP2AQ9NY56 170 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 NME7Q9Y5B8 376 aa20.26■□□□□ 0.83
CPNE7-208ENST00000566398 F11P03951 625 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 PTPN1P18031 435 aaKnown RBP20.25■□□□□ 0.83
CPNE7-208ENST00000566398 CD72P21854 359 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 ANXA13P27216 316 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 AVPR1AP37288 418 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 GRIK1P39086 918 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 ENPEPQ07075 957 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 SGSM1Q2NKQ1 1148 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 C1orf220Q5T0J3 134 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 ZNF658Q5TYW1 1059 aaPredicted RBP20.25■□□□□ 0.83
CPNE7-208ENST00000566398 CMTM8Q8IZV2 173 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 B3GALNT2Q8NCR0 500 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 TAF4BQ92750 862 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 SPATA17Q96L03 361 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 MYRFLQ96LU7 910 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 CEP295NLQ96MC4 621 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 SLC46A2Q9BY10 475 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 GTPBP4Q9BZE4 634 aaKnown RBP20.25■□□□□ 0.83
CPNE7-208ENST00000566398 OSBPL6Q9BZF3 934 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 ELOVL4Q9GZR5 314 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 DPEP3Q9H4B8 488 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 DLGAP2Q9P1A6 1054 aa20.25■□□□□ 0.83
CPNE7-208ENST00000566398 MRPS17Q9Y2R5 130 aaKnown RBP20.25■□□□□ 0.83
CPNE7-208ENST00000566398 CACNA1HO95180 2353 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 PIEZO1Q92508 2521 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 TCHHQ07283 1943 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 FAM170BA6NMN3 283 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 TRIM66O15016 1216 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 CHADO15335 359 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 KINO60870 393 aaKnown RBP20.24■□□□□ 0.83
CPNE7-208ENST00000566398 TRIM49P0CI25 452 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 TRIM49CP0CI26 452 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 RAP1GAPP47736 663 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 CDH8P55286 799 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 ANGPT1Q15389 498 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 MAB21L3Q8N8X9 362 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 SPATA20Q8TB22 786 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms