RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 EML5Q05BV3 1969 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 NCOR2Q9Y618 2525 aa20.22■□□□□ 0.83
ABCA3-204ENST00000566200 KIAA1549LQ6ZVL6 1849 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 RALGAPA1Q6GYQ0 2036 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 CNR2P34972 360 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 HOXD13P35453 343 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 NAIF1Q69YI7 327 aaPredicted RBP20.21■□□□□ 0.83
ABCA3-204ENST00000566200 LIMS2Q7Z4I7 341 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 WDR5BQ86VZ2 330 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 OR5B17Q8NGF7 314 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 TRMT2BQ96GJ1 504 aaKnown RBP20.21■□□□□ 0.83
ABCA3-204ENST00000566200 MYRFLQ96LU7 910 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 SLC22A12Q96S37 553 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 KIF9Q9HAQ2 790 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 MYO16Q9Y6X6 1858 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 PTPRDP23468 1912 aa20.21■□□□□ 0.83
ABCA3-204ENST00000566200 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
ABCA3-204ENST00000566200 DCDC2BA2VCK2 349 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 SOBPA7XYQ1 873 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 ATP2C2O75185 946 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 KRT19P08727 400 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 RBP5P82980 135 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 MYL7Q01449 175 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 ZNF268Q14587 947 aaPredicted RBP20.2■□□□□ 0.82
ABCA3-204ENST00000566200 ADGRF2Q8IZF7 708 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 GPD1LQ8N335 351 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 FAM160A2Q8N612 972 aaPredicted RBP20.2■□□□□ 0.82
ABCA3-204ENST00000566200 TOP6BLQ8N6T0 577 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 PDILTQ8N807 584 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 NOC3LQ8WTT2 800 aaKnown RBP20.2■□□□□ 0.82
ABCA3-204ENST00000566200 KBTBD7Q8WVZ9 684 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 MRPS31Q92665 395 aaKnown RBP20.2■□□□□ 0.82
ABCA3-204ENST00000566200 TMEM206Q9H813 350 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 SEMA4GQ9NTN9 838 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
ABCA3-204ENST00000566200 POLR3BQ9NW08 1133 aaPredicted RBP20.2■□□□□ 0.82
ABCA3-204ENST00000566200 ATG2BQ96BY7 2078 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 TRDMT1O14717 391 aaKnown RBP20.19■□□□□ 0.82
ABCA3-204ENST00000566200 LRP3O75074 770 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 PXNP49023 591 aaPredicted RBP20.19■□□□□ 0.82
ABCA3-204ENST00000566200 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
ABCA3-204ENST00000566200 RPL10AP62906 217 aaKnown RBP20.19■□□□□ 0.82
ABCA3-204ENST00000566200 CFAP221Q4G0U5 840 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 FAM171BQ6P995 826 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.19■□□□□ 0.82
ABCA3-204ENST00000566200 CBWD2Q8IUF1 395 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 SPATA18Q8TC71 538 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 CYP2S1Q96SQ9 504 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 RTKNQ9BST9 563 aa20.19■□□□□ 0.82
ABCA3-204ENST00000566200 EGFP01133 1207 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 TMEM191BP0C7N4 346 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 LMO2P25791 158 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 E2F4Q16254 413 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 CSRP2Q16527 193 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 PRR23CQ6ZRP0 262 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 CCDC65Q8IXS2 484 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 EZH1Q92800 747 aaPredicted RBP20.18■□□□□ 0.82
ABCA3-204ENST00000566200 INTS4Q96HW7 963 aaKnown RBP20.18■□□□□ 0.82
ABCA3-204ENST00000566200 FOXD4L1Q9NU39 408 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 GCNT4Q9P109 453 aa20.18■□□□□ 0.82
ABCA3-204ENST00000566200 UXTQ9UBK9 157 aaPredicted RBP20.18■□□□□ 0.82
ABCA3-204ENST00000566200 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.17■□□□□ 0.82
ABCA3-204ENST00000566200 GDF9O60383 454 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 LHX1P48742 406 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 FAM160A1Q05DH4 1040 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 GRSF1Q12849 480 aaKnown RBP eCLIP20.17■□□□□ 0.82
ABCA3-204ENST00000566200 USP4Q13107 963 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 MTF1Q14872 753 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 ZNF77Q15935 545 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 SPATA2LQ8IUW3 424 aaPredicted RBP20.17■□□□□ 0.82
ABCA3-204ENST00000566200 LINC00301Q8NCQ3 95 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 FUBP3Q96I24 572 aaKnown RBP eCLIP20.17■□□□□ 0.82
ABCA3-204ENST00000566200 CRTAC1Q9NQ79 661 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 KBTBD4Q9NVX7 518 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 NME7Q9Y5B8 376 aa20.17■□□□□ 0.82
ABCA3-204ENST00000566200 C2orf78A6NCI8 922 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 SLC30A4O14863 429 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 KIAA0391O15091 583 aaKnown RBP20.16■□□□□ 0.82
ABCA3-204ENST00000566200 RNF40O75150 1001 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 PCSK1P29120 753 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 GJA4P35212 333 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 MAGEA11P43364 429 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 GALK1P51570 392 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 PSMC1P62191 440 aaKnown RBP20.16■□□□□ 0.82
ABCA3-204ENST00000566200 PDGFRLQ15198 375 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 CEP68Q76N32 757 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 EPM2AIP1Q7L775 607 aaPredicted RBP20.16■□□□□ 0.82
ABCA3-204ENST00000566200 DPH6Q7L8W6 267 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 SCN4BQ8IWT1 228 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 NETO1Q8TDF5 533 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 HPDLQ96IR7 371 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 ANKRD36BP1Q96IX9 119 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 TRIM9Q9C026 710 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 TNMDQ9H2S6 317 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
ABCA3-204ENST00000566200 TRPC7Q9HCX4 862 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 HSPBP1Q9NZL4 362 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 WNT6Q9Y6F9 365 aa20.16■□□□□ 0.82
ABCA3-204ENST00000566200 ZNF233A6NK53 670 aa20.15■□□□□ 0.82
ABCA3-204ENST00000566200 STX6O43752 255 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms