RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 WDR72Q3MJ13 1102 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 LMBRD2Q68DH5 695 aaPredicted RBP17.89■□□□□ 0.45
USB1-211ENST00000565662 GAREM2Q75VX8 874 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 LRRTM3Q86VH5 581 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 GRAMD1CQ8IYS0 662 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 TMEM130Q8N3G9 435 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 KIAA1958Q8N8K9 716 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 PKMYT1Q99640 499 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 ELOVL4Q9GZR5 314 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 FAM124BQ9H5Z6 455 aaPredicted RBP17.89■□□□□ 0.45
USB1-211ENST00000565662 PTPRJQ12913 1337 aa17.89■□□□□ 0.45
USB1-211ENST00000565662 STX10O60499 249 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 CLSTN1O94985 981 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 GNL1P36915 607 aaPredicted RBP17.88■□□□□ 0.45
USB1-211ENST00000565662 LRRC32Q14392 662 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 UBXN2BQ14CS0 331 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 SGSM1Q2NKQ1 1148 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 EDRF1Q3B7T1 1238 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 ZNF528Q3MIS6 628 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 ZNF667Q5HYK9 610 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 ARID3BQ8IVW6 561 aaPredicted RBP17.88■□□□□ 0.45
USB1-211ENST00000565662 TTC9BQ8N6N2 239 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 MYCBPAPQ8TBZ2 947 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 BPIFB1Q8TDL5 484 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 FAXDC2Q96IV6 333 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 GSDMAQ96QA5 445 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 LPIN3Q9BQK8 851 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 PI4K2AQ9BTU6 479 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 MKNK1Q9BUB5 465 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 GTF3C4Q9UKN8 822 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 FBXO4Q9UKT5 387 aa17.88■□□□□ 0.45
USB1-211ENST00000565662 H0Y858 1186 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 NR2F2P24468 414 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 NLRP12P59046 1061 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 NCOA4Q13772 614 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 COBLL1Q53SF7 1204 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 ALYREFQ86V81 257 aaKnown RBP17.87■□□□□ 0.45
USB1-211ENST00000565662 C1orf210Q8IVY1 113 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 ELOA2Q8IYF1 753 aaPredicted RBP17.87■□□□□ 0.45
USB1-211ENST00000565662 CMTM8Q8IZV2 173 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 TTC39CQ8N584 583 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 OR6B3Q8NGW1 331 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 KBTBD7Q8WVZ9 684 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 CLDN23Q96B33 292 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 TIGD1Q96MW7 591 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 FAM126AQ9BYI3 521 aaPredicted RBP17.87■□□□□ 0.45
USB1-211ENST00000565662 DLGAP2Q9P1A6 1054 aa17.87■□□□□ 0.45
USB1-211ENST00000565662 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
USB1-211ENST00000565662 COL4A2P08572 1712 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 OBSL1O75147 1896 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 PTPRDP23468 1912 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 TICRRQ7Z2Z1 1910 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 FAM170BA6NMN3 283 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 LAMTOR5O43504 91 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 PI15O43692 258 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 PSMC2P35998 433 aaKnown RBP17.86■□□□□ 0.45
USB1-211ENST00000565662 FAM160A1Q05DH4 1040 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 STIM1Q13586 685 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 GRM2Q14416 872 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 MAMSTRQ6ZN01 415 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 MON1AQ86VX9 555 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 RALGPS2Q86X27 583 aaPredicted RBP17.86■□□□□ 0.45
USB1-211ENST00000565662 GIPC2Q8TF65 315 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 MYLPFQ96A32 169 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 ZSWIM3Q96MP5 696 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 TSG101Q99816 390 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 PLA2G2FQ9BZM2 168 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 IL21Q9HBE4 155 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 HEBP1Q9NRV9 189 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 PIAS3Q9Y6X2 628 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 PATJQ8NI35 1801 aa17.86■□□□□ 0.45
USB1-211ENST00000565662 KIF26AQ9ULI4 1882 aaPredicted RBP17.86■□□□□ 0.45
USB1-211ENST00000565662 TRAV19A0A0A6YYK7 116 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 LRRIQ3A6PVS8 624 aaPredicted RBP17.85■□□□□ 0.45
USB1-211ENST00000565662 A8MXQ7 604 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 SOAT2O75908 522 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 F11P03951 625 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 USP17L7P0C7H9 530 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 HMGA1P17096 107 aaKnown RBP17.85■□□□□ 0.45
USB1-211ENST00000565662 GJA1P17302 382 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 ACAT1P24752 427 aaKnown RBP17.85■□□□□ 0.45
USB1-211ENST00000565662 CYP2F1P24903 491 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 GTF2H1P32780 548 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 GRIK1P39086 918 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 NOP14P78316 857 aaKnown RBP17.85■□□□□ 0.45
USB1-211ENST00000565662 CYP27A1Q02318 531 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 ZNF638Q14966 1978 aaKnown RBP17.85■□□□□ 0.45
USB1-211ENST00000565662 ZACNQ401N2 412 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 CC2D1AQ6P1N0 951 aaPredicted RBP17.85■□□□□ 0.45
USB1-211ENST00000565662 WDFY4Q6ZS81 3184 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 DENND5BQ6ZUT9 1274 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 UNC93AQ86WB7 457 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 OSTM1Q86WC4 334 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 B3GALNT2Q8NCR0 500 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 PDZD8Q8NEN9 1154 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 FAM3CQ92520 227 aa17.85■□□□□ 0.45
USB1-211ENST00000565662 NKD2Q969F2 451 aaPredicted RBP17.85■□□□□ 0.45
USB1-211ENST00000565662 C8orf48Q96LL4 319 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms