RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 CSH1P0DML2 217 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 CSH2P0DML3 217 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 WARSP23381 471 aaKnown RBP16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 GNL1P36915 607 aaPredicted RBP16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 CSTF1Q05048 431 aaKnown RBP16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 FCHO2Q0JRZ9 810 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 FZD5Q13467 585 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 FAM171BQ6P995 826 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 MAML2Q8IZL2 1156 aaPredicted RBP16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 CMTM8Q8IZV2 173 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 GOLGA5Q8TBA6 731 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 SPATA18Q8TC71 538 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 BPIFB1Q8TDL5 484 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 SCAND2PQ9GZW5 306 aaPredicted RBP16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 GOLPH3LQ9H4A5 285 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 LMAN1LQ9HAT1 526 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 ABCB6Q9NP58 842 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 TRPV5Q9NQA5 729 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 GTSE1Q9NYZ3 720 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 MAGEC2Q9UBF1 373 aaPredicted RBP16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 CDH9Q9ULB4 789 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 MAPK8IP1Q9UQF2 711 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 NME7Q9Y5B8 376 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
LPCAT4-204ENST00000563240 BDNFP23560 247 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 AVPR1AP37288 418 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 GRIK1P39086 918 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 TNNC1P63316 161 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 TNK2Q07912 1038 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 MDH1BQ5I0G3 518 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 CEP135Q66GS9 1140 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 TSSK4Q6SA08 328 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 LIMS2Q7Z4I7 341 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 CELF5Q8N6W0 485 aaKnown RBP16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 MRPS31Q92665 395 aaKnown RBP16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 CLDN23Q96B33 292 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 CCL26Q9Y258 94 aa16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 ZFHX2Q9C0A1 2572 aaPredicted RBP16.31■□□□□ 0.2
LPCAT4-204ENST00000563240 LRRIQ3A6PVS8 624 aaPredicted RBP16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 NR3C1P04150 777 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 DLG4P78352 724 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 MTAPQ13126 283 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 KRBA2Q6ZNG9 492 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 PARD3BQ8TEW8 1205 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 CCDC47Q96A33 483 aaKnown RBP16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 PCED1BQ96HM7 432 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 KCTD10Q9H3F6 313 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 DPEP3Q9H4B8 488 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 GKN1Q9NS71 199 aa16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
LPCAT4-204ENST00000563240 FAM237AA0A1B0GTK4 181 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 NOL4O94818 638 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 ZNF202O95125 648 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 MYL1P05976 194 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 RPS9P46781 194 aaKnown RBP16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 CDH8P55286 799 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 TDRD10Q5VZ19 366 aaKnown RBP16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 MON1AQ86VX9 555 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 ZNF687Q8N1G0 1237 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 MYCBPAPQ8TBZ2 947 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 FUBP3Q96I24 572 aaKnown RBP eCLIP16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 XYLT2Q9H1B5 865 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.21e-11■■■■■ 67.1
LPCAT4-204ENST00000563240 RBM12Q9NTZ6 932 aaKnown RBP16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 DMAC2Q9NW81 257 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 OBP2AQ9NY56 170 aa16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 UXTQ9UBK9 157 aaPredicted RBP16.29■□□□□ 0.2
LPCAT4-204ENST00000563240 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 A8MXQ7 604 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 SPECC1L-ADORA2AF8WAN1 911 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 PDXKO00764 312 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 TACC1O75410 805 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 TADA3O75528 432 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 PTPN1P18031 435 aaKnown RBP16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 DDX6P26196 483 aaKnown RBP eCLIP16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 ANXA13P27216 316 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 WEE1P30291 646 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 MAGEA9P43362 315 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 MAGEA11P43364 429 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 DPYDQ12882 1025 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 NCOA4Q13772 614 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 BECN1Q14457 450 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 MAPRE1Q15691 268 aaKnown RBP16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 TRIM68Q6AZZ1 485 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 TXNDC11Q6PKC3 985 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 MYRFLQ96LU7 910 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 SLC22A12Q96S37 553 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms