RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MRGPRGQ86SM5 289 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 MYLK4Q86YV6 388 aaPredicted RBP7.57□□□□□ -1.2
SMG1-204ENST00000561940 LCORLQ8N3X6 602 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 AMER2Q8N7J2 671 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 ASB10Q8WXI3 467 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 BRI3BPQ8WY22 251 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 C18orf8Q96DM3 657 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 ZC3H10Q96K80 434 aaKnown RBP7.57□□□□□ -1.2
SMG1-204ENST00000561940 CHST8Q9H2A9 424 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 CYP4F11Q9HBI6 524 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 MYO1AQ9UBC5 1043 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 XPR1Q9UBH6 696 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 ITGB1BP2Q9UKP3 347 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 TMX2Q9Y320 296 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 A0A087WV62 115 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 A0A087X1B8 175 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 TMEM191CA6NGB0 347 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 FOXN1O15353 648 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 PIP5K1CO60331 668 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 CDKL5O76039 1030 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 ANXA2P07355 339 aaKnown RBP7.56□□□□□ -1.2
SMG1-204ENST00000561940 ITGAMP11215 1152 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 FDXRP22570 491 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 CARSP49589 748 aaKnown RBP7.56□□□□□ -1.2
SMG1-204ENST00000561940 INHBCP55103 352 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 CXADRP78310 365 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 POU6F2P78424 691 aaPredicted RBP7.56□□□□□ -1.2
SMG1-204ENST00000561940 TNFAIP2Q03169 654 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 KRT72Q14CN4 511 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 SLC44A4Q53GD3 710 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 CCDC174Q6PII3 467 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 ZDHHC24Q6UX98 284 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 NUP133Q8WUM0 1156 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 RAPGEF4Q8WZA2 1011 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 IQCDQ96DY2 449 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 LRIG1Q96JA1 1093 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 SPATA5L1Q9BVQ7 753 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 ETAA1Q9NY74 926 aa7.56□□□□□ -1.2
SMG1-204ENST00000561940 MBD3L4A6NDZ8 208 aaPredicted RBP7.55□□□□□ -1.2
SMG1-204ENST00000561940 MBD3L3A6NE82 208 aaPredicted RBP7.55□□□□□ -1.2
SMG1-204ENST00000561940 MARCH11A6NNE9 402 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 CHEK2O96017 543 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 KLRC1P26715 233 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 TOB1P50616 345 aaPredicted RBP7.55□□□□□ -1.2
SMG1-204ENST00000561940 FAM160B1Q5W0V3 765 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 CFAP52Q8N1V2 620 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 TXLNBQ8N3L3 684 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 BEND2Q8NDZ0 799 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
SMG1-204ENST00000561940 NACC2Q96BF6 587 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 PNKPQ96T60 521 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 PRRX2Q99811 253 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 SELENOOQ9BVL4 669 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 TTLL2Q9BWV7 592 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 TTYH3Q9C0H2 523 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 MS4A7Q9GZW8 240 aaPredicted RBP7.55□□□□□ -1.2
SMG1-204ENST00000561940 A1CFQ9NQ94 594 aaKnown RBP7.55□□□□□ -1.2
SMG1-204ENST00000561940 TBC1D23Q9NUY8 699 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 HESX1Q9UBX0 185 aa7.55□□□□□ -1.2
SMG1-204ENST00000561940 TESQ9UGI8 421 aaKnown RBP7.55□□□□□ -1.2
SMG1-204ENST00000561940 COL4A3Q01955 1670 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 MYO1CO00159 1063 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 DCLK1O15075 740 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 EEF1GP26641 437 aaKnown RBP7.54□□□□□ -1.2
SMG1-204ENST00000561940 HALP42357 657 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 TCF15Q12870 199 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 STARD3Q14849 445 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 SLC30A10Q6XR72 485 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 GPR149Q86SP6 731 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 GPR150Q8NGU9 434 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 LRRC46Q96FV0 321 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 CNPPD1Q9BV87 410 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 MID2Q9UJV3 735 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 MAN2B2Q9Y2E5 1009 aa7.54□□□□□ -1.2
SMG1-204ENST00000561940 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.54□□□□□ -1.2
SMG1-204ENST00000561940 WDR33Q9C0J8 1336 aaKnown RBP7.53□□□□□ -1.2
SMG1-204ENST00000561940 GRID2IPA4D2P6 1211 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 POLRMTO00411 1230 aaKnown RBP7.53□□□□□ -1.2
SMG1-204ENST00000561940 RASSF9O75901 435 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 ZFPL1O95159 310 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 GCP02774 474 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 TXNP10599 105 aaKnown RBP7.53□□□□□ -1.2
SMG1-204ENST00000561940 CHKAP35790 457 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 TECP42680 631 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 C4orf46Q504U0 113 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 TAPT1Q6NXT6 567 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 GGT6Q6P531 493 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 RNF44Q7L0R7 432 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 SYTL1Q8IYJ3 562 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 ZNF566Q969W8 418 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 SPSB4Q96A44 273 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 TMEM41AQ96HV5 264 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 SLC46A1Q96NT5 459 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 TRIB1Q96RU8 372 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 SMOC2Q9H3U7 446 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 GALNT9Q9HCQ5 603 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 SERHLQ9NQF3 203 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 HDAC9Q9UKV0 1011 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 CEP83Q9Y592 693 aa7.53□□□□□ -1.2
SMG1-204ENST00000561940 DMRT1Q9Y5R6 373 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms