RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 PXNP49023 591 aaPredicted RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 SLC11A2P49281 568 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 CCT8P50990 548 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 LOXL3P58215 753 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 KRTAP10-11P60412 298 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 EIF2B5Q13144 721 aaKnown RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 NFE2Q16621 373 aaPredicted RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 AMOTQ4VCS5 1084 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 ODR4Q5SWX8 454 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 SFRP4Q6FHJ7 346 aaPredicted RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 SWSAP1Q6NVH7 229 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 NPNTQ6UXI9 565 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 ZNF551Q7Z340 670 aaPredicted RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 AMIGO2Q86SJ2 522 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 ZNF280BQ86YH2 543 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 KIAA0319LQ8IZA0 1049 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 CAMKK1Q8N5S9 505 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 ZBTB34Q8NCN2 500 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 KBTBD7Q8WVZ9 684 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 ATRIPQ8WXE1 791 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 REPS1Q96D71 796 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 MESP1Q9BRJ9 268 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 ZMAT3Q9HA38 289 aaKnown RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 SMURF2Q9HAU4 748 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 ARHGEF3Q9NR81 526 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 DLL3Q9NYJ7 618 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 SERGEFQ9UGK8 458 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 SERTAD3Q9UJW9 196 aa2.96□□□□□ -1.94
CHD9-204ENST00000561869 NDRG4Q9ULP0 352 aaKnown RBP2.96□□□□□ -1.94
CHD9-204ENST00000561869 MANSC4A6NHS7 340 aaPredicted RBP2.95□□□□□ -1.94
CHD9-204ENST00000561869 A6NNZ2 444 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 hCG_1984214I3L0E3 225 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 SLC16A3O15427 465 aaKnown RBP2.95□□□□□ -1.94
CHD9-204ENST00000561869 TLR5O60602 858 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 CSF1RP07333 972 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 WNT3P56703 355 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 MYO1EQ12965 1108 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 ANO6Q4KMQ2 910 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 PLAC9Q5JTB6 97 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 TREML2Q5T2D2 321 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 ZNF618Q5T7W0 954 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 FAM102BQ5T8I3 360 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 ARHGAP40Q5TG30 622 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 ZKSCAN2Q63HK3 967 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 FCRLBQ6BAA4 426 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 CXorf57Q6NSI4 855 aaKnown RBP2.95□□□□□ -1.94
CHD9-204ENST00000561869 DAAM2Q86T65 1068 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 GAS2L3Q86XJ1 694 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 IL31RAQ8NI17 732 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 ATG4AQ8WYN0 398 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 MAML1Q92585 1016 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 B3GNT5Q9BYG0 378 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 TMEM60Q9H2L4 133 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 CXorf36Q9H7Y0 433 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 PIH1D1Q9NWS0 290 aaKnown RBP2.95□□□□□ -1.94
CHD9-204ENST00000561869 SH2B3Q9UQQ2 575 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 MRPS17Q9Y2R5 130 aaKnown RBP2.95□□□□□ -1.94
CHD9-204ENST00000561869 TMX2Q9Y320 296 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 WNT6Q9Y6F9 365 aa2.95□□□□□ -1.94
CHD9-204ENST00000561869 USP19O94966 1318 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 FNDC1Q4ZHG4 1894 aaPredicted RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 SETD1BQ9UPS6 1966 aaKnown RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 TARM1B6A8C7 271 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 H0YIZ8 118 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 INO80B-WBP1J3KQ70 363 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 MYO1FO00160 1098 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 BTN3A1O00481 513 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 PHGDHO43175 533 aaKnown RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 CTNND1O60716 968 aaKnown RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 NXPH3O95157 252 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 LATS1O95835 1130 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 SCGB1D2O95969 90 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 HNRNPCP07910 306 aaKnown RBP eCLIP2.94□□□□□ -1.941e-6■■■□□ 15.4
CHD9-204ENST00000561869 FAM163BP0C2L3 166 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 EBLN1P0CF75 366 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 NHLRC4P0CG21 123 aaPredicted RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 KITP10721 976 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 CYP2C9P11712 490 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 EN2P19622 333 aaPredicted RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 CLCN2P51788 898 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 DGKEP52429 567 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 ATXN1P54253 815 aaKnown RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 GPSM2P81274 684 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 CTBP1Q13363 440 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 TEDDM1Q5T9Z0 273 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 NXNQ6DKJ4 435 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 RGS7BPQ6MZT1 257 aaPredicted RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 ANKRD16Q6P6B7 361 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 LAYNQ6UX15 382 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 MAEAQ7L5Y9 396 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 PTF1AQ7RTS3 328 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 CHPFQ8IZ52 775 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 SLC15A4Q8N697 577 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 DNAJC5GQ8N7S2 189 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 HASPINQ8TF76 798 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 GLG1Q92896 1179 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 MOGAT1Q96PD6 335 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 C22orf23Q9BZE7 217 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 INO80BQ9C086 356 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms