RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 KRT85P78386 507 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 CSTF1Q05048 431 aaKnown RBP11.02□□□□□ -0.65
CLK3-205ENST00000561673 PSMD2Q13200 908 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 TXNDC8Q6A555 127 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.65
CLK3-205ENST00000561673 CMTM8Q8IZV2 173 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 MAB21L3Q8N8X9 362 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 KIAA0895Q8NCT3 520 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 CSGALNACT1Q8TDX6 532 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 MMS19Q96T76 1030 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 EXOC1Q9NV70 894 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 DMAC2Q9NW81 257 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 OBP2AQ9NY56 170 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 USP25Q9UHP3 1055 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 FBXO4Q9UKT5 387 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 CDH9Q9ULB4 789 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 SLC38A8A6NNN8 435 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 EXOC3O60645 756 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 NOL4O94818 638 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 LMNAP02545 664 aaKnown RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 WARSP23381 471 aaKnown RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 GNL1P36915 607 aaPredicted RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 SYKP43405 635 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 SOX9P48436 509 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 CASP4P49662 377 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 NDUFA8P51970 172 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 KPNA1P52294 538 aaPredicted RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 PSMC1P62191 440 aaKnown RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 RPL10AP62906 217 aaKnown RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 TNK2Q07912 1038 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 MTAPQ13126 283 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 ZNF528Q3MIS6 628 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 WDR72Q3MJ13 1102 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 ARHGAP29Q52LW3 1261 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 ADSSL1Q8N142 457 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 TTC8Q8TAM2 541 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 GOLGA5Q8TBA6 731 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 PLEKHO2Q8TD55 490 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 BPIFB1Q8TDL5 484 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 FUBP3Q96I24 572 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLK3-205ENST00000561673 SYT15Q9BQS2 421 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 MRPL45Q9BRJ2 306 aaKnown RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 KCTD10Q9H3F6 313 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 SEMA4AQ9H3S1 761 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 C8orf33Q9H7E9 229 aaPredicted RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 LMAN1LQ9HAT1 526 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 CRTAC1Q9NQ79 661 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 GTSE1Q9NYZ3 720 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 MAGEC2Q9UBF1 373 aaPredicted RBP11.01□□□□□ -0.65
CLK3-205ENST00000561673 ZMYM5Q9UJ78 669 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 CCL26Q9Y258 94 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 DMXL1Q9Y485 3027 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 DCHS1Q96JQ0 3298 aa11.01□□□□□ -0.65
CLK3-205ENST00000561673 FAM237AA0A1B0GTK4 181 aa11□□□□□ -0.65
CLK3-205ENST00000561673 TACC1O75410 805 aa11□□□□□ -0.65
CLK3-205ENST00000561673 TADA3O75528 432 aa11□□□□□ -0.65
CLK3-205ENST00000561673 RPN1P04843 607 aaKnown RBP11□□□□□ -0.65
CLK3-205ENST00000561673 MYL1P05976 194 aa11□□□□□ -0.65
CLK3-205ENST00000561673 CHRNB1P11230 501 aa11□□□□□ -0.65
CLK3-205ENST00000561673 BDNFP23560 247 aa11□□□□□ -0.65
CLK3-205ENST00000561673 DDX6P26196 483 aaKnown RBP eCLIP11□□□□□ -0.65
CLK3-205ENST00000561673 AVPR1AP37288 418 aa11□□□□□ -0.65
CLK3-205ENST00000561673 MAGEA11P43364 429 aa11□□□□□ -0.65
CLK3-205ENST00000561673 MYL6P60660 151 aa11□□□□□ -0.65
CLK3-205ENST00000561673 CLDN10P78369 228 aa11□□□□□ -0.65
CLK3-205ENST00000561673 TRPC3Q13507 836 aa11□□□□□ -0.65
CLK3-205ENST00000561673 ZC3H14Q6PJT7 736 aaKnown RBP11□□□□□ -0.65
CLK3-205ENST00000561673 TSSK4Q6SA08 328 aa11□□□□□ -0.65
CLK3-205ENST00000561673 C4orf50Q6ZRC1 276 aa11□□□□□ -0.65
CLK3-205ENST00000561673 MON1AQ86VX9 555 aa11□□□□□ -0.65
CLK3-205ENST00000561673 SLC9A9Q8IVB4 645 aa11□□□□□ -0.65
CLK3-205ENST00000561673 SCN4BQ8IWT1 228 aa11□□□□□ -0.65
CLK3-205ENST00000561673 CELF5Q8N6W0 485 aaKnown RBP11□□□□□ -0.65
CLK3-205ENST00000561673 MYCBPAPQ8TBZ2 947 aa11□□□□□ -0.65
CLK3-205ENST00000561673 PARD3BQ8TEW8 1205 aa11□□□□□ -0.65
CLK3-205ENST00000561673 TMEM174Q8WUU8 243 aa11□□□□□ -0.65
CLK3-205ENST00000561673 MRPS31Q92665 395 aaKnown RBP11□□□□□ -0.65
CLK3-205ENST00000561673 USP13Q92995 863 aaPredicted RBP11□□□□□ -0.65
CLK3-205ENST00000561673 MYLPFQ96A32 169 aa11□□□□□ -0.65
CLK3-205ENST00000561673 TRMT2BQ96GJ1 504 aaKnown RBP11□□□□□ -0.65
CLK3-205ENST00000561673 MYRFLQ96LU7 910 aa11□□□□□ -0.65
CLK3-205ENST00000561673 XYLT2Q9H1B5 865 aa11□□□□□ -0.65
CLK3-205ENST00000561673 CHRDQ9H2X0 955 aa11□□□□□ -0.65
CLK3-205ENST00000561673 SNX25Q9H3E2 840 aa11□□□□□ -0.65
CLK3-205ENST00000561673 GKN1Q9NS71 199 aa11□□□□□ -0.65
CLK3-205ENST00000561673 TDP1Q9NUW8 608 aa11□□□□□ -0.65
CLK3-205ENST00000561673 THG1LQ9NWX6 298 aaKnown RBP11□□□□□ -0.65
CLK3-205ENST00000561673 UXTQ9UBK9 157 aaPredicted RBP11□□□□□ -0.65
CLK3-205ENST00000561673 ZNF292O60281 2723 aa11□□□□□ -0.65
CLK3-205ENST00000561673 TCHHQ07283 1943 aa10.99□□□□□ -0.65
CLK3-205ENST00000561673 LRRIQ3A6PVS8 624 aaPredicted RBP10.99□□□□□ -0.65
CLK3-205ENST00000561673 SOBPA7XYQ1 873 aa10.99□□□□□ -0.65
CLK3-205ENST00000561673 SPECC1L-ADORA2AF8WAN1 911 aa10.99□□□□□ -0.65
CLK3-205ENST00000561673 PDXKO00764 312 aa10.99□□□□□ -0.65
CLK3-205ENST00000561673 PHACTR2O75167 634 aa10.99□□□□□ -0.65
CLK3-205ENST00000561673 STAU1O95793 577 aaKnown RBP10.99□□□□□ -0.65
CLK3-205ENST00000561673 C4BPAP04003 597 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms