RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PSMC1P62191 440 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 NOP14P78316 857 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 GPC5P78333 572 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 PAK1Q13153 545 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 TEAD2Q15562 447 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CAMK4Q16566 473 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 DDR2Q16832 855 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SLC5A9Q2M3M2 681 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CCDC40Q4G0X9 1142 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ZCWPW2Q504Y3 356 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 MDH1BQ5I0G3 518 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FAM78AQ5JUQ0 283 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 PRSS36Q5K4E3 855 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 GPR158Q5T848 1215 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ANKRD40Q6AI12 368 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FAM171BQ6P995 826 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 C1orf228Q6PIY5 440 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FOXR2Q6PJQ5 311 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SCARA5Q6ZMJ2 495 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CLEC17AQ6ZS10 378 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 LIMS2Q7Z4I7 341 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FRMD5Q7Z6J6 570 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FILIP1Q7Z7B0 1213 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 UNC93AQ86WB7 457 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CREBRFQ8IUR6 639 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SCN4BQ8IWT1 228 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 YAF2Q8IY57 180 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SIX5Q8N196 739 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 TTC9BQ8N6N2 239 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 B3GALNT2Q8NCR0 500 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FBXL13Q8NEE6 735 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FLCNQ8NFG4 579 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 GPR152Q8TDT2 470 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 GIPC2Q8TF65 315 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 DEPDC1BQ8WUY9 529 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 KBTBD7Q8WVZ9 684 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 NELFBQ8WX92 580 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 MRPS31Q92665 395 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 SMARCD2Q92925 531 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 IRF7Q92985 503 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 TCEAL4Q96EI5 215 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ASIC4Q96FT7 647 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 PCED1BQ96HM7 432 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FAM84AQ96KN4 292 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SPATA17Q96L03 361 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CEP63Q96MT8 703 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ASB16Q96NS5 453 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 IPO9Q96P70 1041 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 SLITRK1Q96PX8 696 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 LPIN3Q9BQK8 851 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 MRPL45Q9BRJ2 306 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 MED10Q9BTT4 135 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ELOVL4Q9GZR5 314 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 XYLT2Q9H1B5 865 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 IRF2BPLQ9H1B7 796 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 DNAJC25Q9H1X3 360 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CRISPLD1Q9H336 500 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 FAM124BQ9H5Z6 455 aaPredicted RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 TASP1Q9H6P5 420 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SMYD3Q9H7B4 428 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 BRD9Q9H8M2 597 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 CYP3A43Q9HB55 503 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 ARHGEF3Q9NR81 526 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 SLC2A4RGQ9NR83 387 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 TMLHEQ9NVH6 421 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 THG1LQ9NWX6 298 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 RAB20Q9NX57 234 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 KIAA1468Q9P260 1216 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 DACH1Q9UI36 760 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 MAN1B1Q9UKM7 699 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 MRPS17Q9Y2R5 130 aaKnown RBP4.66□□□□□ -1.66
SNX1-205ENST00000559339 ATG2AQ2TAZ0 1938 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 MYH15Q9Y2K3 1946 aa4.66□□□□□ -1.66
SNX1-205ENST00000559339 TRIM49BA6NDI0 452 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 SLC38A8A6NNN8 435 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 MAN2B1O00754 1011 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 P4HA2O15460 535 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 NARSO43776 548 aaKnown RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 ATP2C2O75185 946 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 RTN3O95197 1032 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 VNN1O95497 513 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 VNN2O95498 520 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 HLA-DRAP01903 254 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TRIM49P0CI25 452 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TRIM49CP0CI26 452 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CCDC192P0DO97 292 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 GLULP15104 373 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 GJA1P17302 382 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 PFKLP17858 780 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CD58P19256 250 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 BDNFP23560 247 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TBXAS1P24557 533 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 WEE1P30291 646 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 AVPR2P30518 371 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 VIPR2P41587 438 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CCR2P41597 374 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 PMS1P54277 932 aaKnown RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 CDH8P55286 799 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 NLRP12P59046 1061 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 YWHAEP62258 255 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms