RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 AS3MTQ9HBK9 375 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 ZMYND8Q9ULU4 1186 aaPredicted RBP17.42■□□□□ 0.38
SPG11-215ENST00000559193 MSCO60682 206 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 LRCH4O75427 683 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 ARL4CP56559 192 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 STXBP2Q15833 593 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 KCNT1Q5JUK3 1230 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 PCGF5Q86SE9 256 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 ATP11CQ8NB49 1132 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 SLC7A6OSQ96CW6 309 aaPredicted RBP17.42■□□□□ 0.38
SPG11-215ENST00000559193 PHACTR1Q9C0D0 580 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 FETUBQ9UGM5 382 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 HACL1Q9UJ83 578 aa17.42■□□□□ 0.38
SPG11-215ENST00000559193 CST8O60676 142 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 ZWINTO95229 277 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 ADRA1DP25100 572 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 ASPAP45381 313 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 SLC8A3P57103 927 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 MAPK6Q16659 721 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 BBS12Q6ZW61 710 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 RHPN2Q8IUC4 686 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 KIAA0319LQ8IZA0 1049 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 AGGF1Q8N302 714 aaeCLIP17.41■□□□□ 0.38
SPG11-215ENST00000559193 MAB21L3Q8N8X9 362 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 PYROXD1Q8WU10 500 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 PAFAH2Q99487 392 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 CYTH4Q9UIA0 394 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 TCRBV7S3A2A0A539 114 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 TOM1L1O75674 476 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 TMEM63AO94886 807 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 ATP2A2P16615 1042 aaKnown RBP17.41■□□□□ 0.38
SPG11-215ENST00000559193 ALDH3A1P30838 453 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 RPL22P35268 128 aaKnown RBP17.41■□□□□ 0.38
SPG11-215ENST00000559193 CNTN2Q02246 1040 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 CRYMQ14894 314 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 SGSM1Q2NKQ1 1148 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 ADGRD1Q6QNK2 874 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 TAB3Q8N5C8 712 aaPredicted RBP17.41■□□□□ 0.38
SPG11-215ENST00000559193 INPP5DQ92835 1189 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 TCHPQ9BT92 498 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 ACSS3Q9H6R3 686 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 EFR3BQ9Y2G0 817 aa17.41■□□□□ 0.38
SPG11-215ENST00000559193 E7ESA3 106 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 CBX6O95503 412 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 UBA1P22314 1058 aaKnown RBP17.4■□□□□ 0.38
SPG11-215ENST00000559193 PHBP35232 272 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 MTM1Q13496 603 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 NAA25Q14CX7 972 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 TAZQ16635 292 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 DUOXA2Q1HG44 320 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 ZNF449Q6P9G9 518 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 CATSPERGQ6ZRH7 1159 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 ZNF276Q8N554 614 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 FBXO36Q8NEA4 188 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
SPG11-215ENST00000559193 XYLT2Q9H1B5 865 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 SLC5A4Q9NY91 659 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 ZNF112Q9UJU3 913 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 CEP83Q9Y592 693 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 ABLIM1O14639 778 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 CD48P09326 243 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 KDELR1P24390 212 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 ZNF699Q32M78 642 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 C3orf62Q6ZUJ4 267 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 CCDC125Q86Z20 511 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 MRPL4Q9BYD3 311 aaKnown RBP17.4■□□□□ 0.38
SPG11-215ENST00000559193 C12orf65Q9H3J6 166 aaKnown RBP17.4■□□□□ 0.38
SPG11-215ENST00000559193 NPHS2Q9NP85 383 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 STRIP2Q9ULQ0 834 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 NUMBLQ9Y6R0 609 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
SPG11-215ENST00000559193 SIGLEC16A6NMB1 481 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 SPDYE16A6NNV3 312 aaPredicted RBP17.39■□□□□ 0.38
SPG11-215ENST00000559193 KRT7P08729 469 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 HOXC6P09630 235 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 KRT3P12035 628 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 TFAMQ00059 246 aaKnown RBP17.39■□□□□ 0.38
SPG11-215ENST00000559193 TRPC3Q13507 836 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 PLEKHG4Q58EX7 1191 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 NLRP9Q7RTR0 991 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 UNC45BQ8IWX7 931 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 FAM13CQ8NE31 585 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 DCAKDQ8WVC6 231 aa17.39■□□□□ 0.38
SPG11-215ENST00000559193 ACO2Q99798 780 aaKnown RBP17.39■□□□□ 0.38
SPG11-215ENST00000559193 FRMD8P1Q9BZ68 369 aaPredicted RBP17.39■□□□□ 0.38
SPG11-215ENST00000559193 NKX1-2Q9UD57 310 aaPredicted RBP17.39■□□□□ 0.38
SPG11-215ENST00000559193 CPSF3Q9UKF6 684 aaKnown RBP17.39■□□□□ 0.38
SPG11-215ENST00000559193 OGTO15294 1046 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 MAFO75444 373 aaPredicted RBP17.39■□□□□ 0.37
SPG11-215ENST00000559193 FARP2O94887 1054 aaPredicted RBP17.39■□□□□ 0.37
SPG11-215ENST00000559193 KLHL38Q2WGJ6 581 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 ZC3H12AQ5D1E8 599 aaKnown RBP17.39■□□□□ 0.37
SPG11-215ENST00000559193 ANKRD20A2Q5SQ80 823 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 ANKRD20A1Q5TYW2 823 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 ANKRD20A3Q5VUR7 823 aa17.39■□□□□ 0.37
SPG11-215ENST00000559193 DCAF15Q66K64 600 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms