RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SNX27Q96L92 541 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 NAP1L4Q99733 375 aaKnown RBP5.25□□□□□ -1.57
CASC4-206ENST00000558847 HEPHQ9BQS7 1158 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 GPR87Q9BY21 358 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 MYLK2Q9H1R3 596 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 CHST8Q9H2A9 424 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 HEYLQ9NQ87 328 aaPredicted RBP5.25□□□□□ -1.57
CASC4-206ENST00000558847 XPNPEP3Q9NQH7 507 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 SLC39A10Q9ULF5 831 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 SLC45A2Q9UMX9 530 aa5.25□□□□□ -1.57
CASC4-206ENST00000558847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.25□□□□□ -1.57
CASC4-206ENST00000558847 CCDC195A0A1B0GUA6 201 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 AQP7P3A6NL99 342 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 TLR5O60602 858 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 FGAP02671 866 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 HSD3B1P14060 373 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 IL1R1P14778 569 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 SLC6A2P23975 617 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 ACVR2AP27037 513 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 LRPAP1P30533 357 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 COPAP53621 1224 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 DPTQ07507 201 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 TOB2Q14106 344 aaPredicted RBP5.24□□□□□ -1.57
CASC4-206ENST00000558847 ZACNQ401N2 412 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 MZT2AQ6P582 158 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 RFX8Q6ZV50 586 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 TMPRSS6Q8IU80 811 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 CFAP52Q8N1V2 620 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 VGLL2Q8N8G2 317 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 MUL1Q969V5 352 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 PAGR1Q9BTK6 254 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 UBA5Q9GZZ9 404 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 IKZF4Q9H2S9 585 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 ZNF703Q9H7S9 590 aaPredicted RBP5.24□□□□□ -1.57
CASC4-206ENST00000558847 AURKAIP1Q9NWT8 199 aaPredicted RBP5.24□□□□□ -1.57
CASC4-206ENST00000558847 CDYLQ9Y232 598 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 MAN2B2Q9Y2E5 1009 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 ATP11BQ9Y2G3 1177 aa5.24□□□□□ -1.57
CASC4-206ENST00000558847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 PODXLO00592 558 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 RECQL4O94761 1208 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 KIF20AO95235 890 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 HLA-DOAP06340 250 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 ADH4P08319 380 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 HK1P19367 917 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 FDXRP22570 491 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 POLE2P56282 527 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 LOXL3P58215 753 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 CRHR2Q13324 411 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 TUBA3CQ13748 450 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 ARHGEF7Q14155 803 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 AGAP9Q5VTM2 703 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 TAPT1Q6NXT6 567 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 TUBA3EQ6PEY2 450 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 CCDC174Q6PII3 467 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 PNISRQ8TF01 805 aaKnown RBP5.23□□□□□ -1.57
CASC4-206ENST00000558847 TRAPPC12Q8WVT3 735 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 PHACTR3Q96KR7 559 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 TRIB1Q96RU8 372 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 RMDN3Q96TC7 470 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 MNTQ99583 582 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 TMEM8AQ9HCN3 771 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 RNF181Q9P0P0 153 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 LUZP4Q9P127 313 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 CAPN11Q9UMQ6 739 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 GTF2A1LQ9UNN4 478 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 REXO2Q9Y3B8 237 aaKnown RBP5.23□□□□□ -1.57
CASC4-206ENST00000558847 RAD54BQ9Y620 910 aa5.23□□□□□ -1.57
CASC4-206ENST00000558847 A0A087X1B8 175 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 HMGB1P1B2RPK0 211 aaPredicted RBP5.22□□□□□ -1.57
CASC4-206ENST00000558847 E9PLN8 166 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 SYT5O00445 386 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 TRIM24O15164 1050 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 PIP5K1CO60331 668 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 A1BGP04217 495 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 FCER1AP12319 257 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 TPH1P17752 444 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 CPT1AP50416 773 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 INHBCP55103 352 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 SLC25A3Q00325 362 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 NHLH2Q02577 135 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 KRT17Q04695 432 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 SLFN5Q08AF3 891 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 FOXO1Q12778 655 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 CNGB1Q14028 1251 aaPredicted RBP5.22□□□□□ -1.57
CASC4-206ENST00000558847 PLA1AQ53H76 456 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 NOMO2Q5JPE7 1267 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 ARMC6Q6NXE6 501 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 SYT12Q8IV01 421 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 ANKRD18AQ8IVF6 992 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 LRRC46Q96FV0 321 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 ZNF668Q96K58 619 aaPredicted RBP5.22□□□□□ -1.57
CASC4-206ENST00000558847 VKORC1Q9BQB6 163 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 MESP1Q9BRJ9 268 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 MMRN2Q9H8L6 949 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 TBC1D23Q9NUY8 699 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 MID2Q9UJV3 735 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 CA14Q9ULX7 337 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 AGAP1Q9UPQ3 857 aa5.22□□□□□ -1.57
CASC4-206ENST00000558847 DGKBQ9Y6T7 804 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms