RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 NXF1Q9UBU9 619 aaKnown RBP12.76□□□□□ -0.37
HERC1-202ENST00000558324 MIA3Q5JRA6 1907 aa12.76□□□□□ -0.37
HERC1-202ENST00000558324 MAN2B1O00754 1011 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 CHADO15335 359 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 F11P03951 625 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 NR3C1P04150 777 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 CSH1P0DML2 217 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 CSH2P0DML3 217 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
HERC1-202ENST00000558324 BDNFP23560 247 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 AVPR1AP37288 418 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 TNK2Q07912 1038 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 PSMD2Q13200 908 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 WDR72Q3MJ13 1102 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 CFAP221Q4G0U5 840 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 MDH1BQ5I0G3 518 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 TSSK4Q6SA08 328 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 C4orf50Q6ZRC1 276 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 MAML2Q8IZL2 1156 aaPredicted RBP12.75□□□□□ -0.37
HERC1-202ENST00000558324 OR6B3Q8NGW1 331 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 BPIFB1Q8TDL5 484 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 PIEZO1Q92508 2521 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 MRPS31Q92665 395 aaKnown RBP12.75□□□□□ -0.37
HERC1-202ENST00000558324 CLDN23Q96B33 292 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 SCAND2PQ9GZW5 306 aaPredicted RBP12.75□□□□□ -0.37
HERC1-202ENST00000558324 GOLPH3LQ9H4A5 285 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 TRPC7Q9HCX4 862 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 TRPV5Q9NQA5 729 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 GTSE1Q9NYZ3 720 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 CDH9Q9ULB4 789 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 MAPK8IP1Q9UQF2 711 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 CCL26Q9Y258 94 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 NME7Q9Y5B8 376 aa12.75□□□□□ -0.37
HERC1-202ENST00000558324 LRRIQ3A6PVS8 624 aaPredicted RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 TADA3O75528 432 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 NOL4O94818 638 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 MAGEA9P43362 315 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 RAP1GAPP47736 663 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 CSTF1Q05048 431 aaKnown RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 MTAPQ13126 283 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 TDRD10Q5VZ19 366 aaKnown RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 FAM171BQ6P995 826 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 SCARA5Q6ZMJ2 495 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 CMTM8Q8IZV2 173 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 CCDC47Q96A33 483 aaKnown RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
HERC1-202ENST00000558324 KCTD10Q9H3F6 313 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 DPEP3Q9H4B8 488 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 UXTQ9UBK9 157 aaPredicted RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
HERC1-202ENST00000558324 NUP210Q8TEM1 1887 aaPredicted RBP12.74□□□□□ -0.37
HERC1-202ENST00000558324 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 A0A1W2PQ27 194 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 A0A1W2PQ64 194 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 A0A1W2PQD8 194 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 A8MXQ7 604 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 SPECC1L-ADORA2AF8WAN1 911 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 PDXKO00764 312 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 MYL1P05976 194 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 ANXA13P27216 316 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 GRIK1P39086 918 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 RPS9P46781 194 aaKnown RBP12.73□□□□□ -0.37
HERC1-202ENST00000558324 DLG4P78352 724 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 DPYDQ12882 1025 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 FZD5Q13467 585 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 BECN1Q14457 450 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 MAPRE1Q15691 268 aaKnown RBP12.73□□□□□ -0.37
HERC1-202ENST00000558324 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
HERC1-202ENST00000558324 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 ADSSL1Q8N142 457 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 ZNF687Q8N1G0 1237 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 USP13Q92995 863 aaPredicted RBP12.73□□□□□ -0.37
HERC1-202ENST00000558324 XYLT2Q9H1B5 865 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 LMAN1LQ9HAT1 526 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 RBM12Q9NTZ6 932 aaKnown RBP12.73□□□□□ -0.37
HERC1-202ENST00000558324 DMAC2Q9NW81 257 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 THG1LQ9NWX6 298 aaKnown RBP12.73□□□□□ -0.37
HERC1-202ENST00000558324 OBP2AQ9NY56 170 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 PATJQ8NI35 1801 aa12.73□□□□□ -0.37
HERC1-202ENST00000558324 CALUO43852 315 aaPredicted RBP12.72□□□□□ -0.37
HERC1-202ENST00000558324 TACC1O75410 805 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 ZNF202O95125 648 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 CKMP06732 381 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 PTPN1P18031 435 aaKnown RBP12.72□□□□□ -0.37
HERC1-202ENST00000558324 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.37
HERC1-202ENST00000558324 ATICP31939 592 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 CTHP32929 405 aa12.72□□□□□ -0.37
HERC1-202ENST00000558324 MAGEA11P43364 429 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms