RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PSMC1P62191 440 aaKnown RBP15.54■□□□□ 0.08
VPS33B-205ENST00000556096 ZNF252P-AS1Q0IIN9 211 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 PAK2Q13177 524 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 PDCLQ13371 301 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 DHX34Q14147 1143 aaKnown RBP15.54■□□□□ 0.08
VPS33B-205ENST00000556096 DSC3Q14574 896 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 PKDCCQ504Y2 493 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 ARHGAP17Q68EM7 881 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 EMBQ6PCB8 327 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 NECAB2Q7Z6G3 386 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 TOP6BLQ8N6T0 577 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 ANKLE1Q8NAG6 615 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 SLC43A3Q8NBI5 491 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 OR6B3Q8NGW1 331 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 RUNDC3BQ96NL0 473 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 AMACRQ9UHK6 382 aa15.54■□□□□ 0.08
VPS33B-205ENST00000556096 FAM187AA6NFU0 413 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 ERBB2P04626 1255 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 PFKMP08237 780 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 PLA2G4AP47712 749 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 TAS2R40P59535 323 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 LILRA4P59901 499 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 OGDHQ02218 1023 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 NNTQ13423 1086 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 CUL1Q13616 776 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 PPP1R26Q5T8A7 1209 aaPredicted RBP15.53■□□□□ 0.08
VPS33B-205ENST00000556096 ACOT1Q86TX2 421 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 PRELID2Q8N945 189 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 GSTCDQ8NEC7 633 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 APPL2Q8NEU8 664 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 EXD1Q8NHP7 514 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 UBA3Q8TBC4 463 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 IPO4Q8TEX9 1081 aaKnown RBP15.53■□□□□ 0.08
VPS33B-205ENST00000556096 KBTBD7Q8WVZ9 684 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 CASKIN2Q8WXE0 1202 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 SEC14L1Q92503 715 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 CAVIN3Q969G5 261 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 ZFP42Q96MM3 310 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 HINFPQ9BQA5 517 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 SYNCQ9H7C4 482 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 GOLGA2P5Q9HBQ8 144 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 PCYOX1Q9UHG3 505 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 NOD1Q9Y239 953 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 NME7Q9Y5B8 376 aa15.53■□□□□ 0.08
VPS33B-205ENST00000556096 A8MXQ7 604 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 HUS1O60921 280 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 THP07101 528 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 WARSP23381 471 aaKnown RBP15.52■□□□□ 0.08
VPS33B-205ENST00000556096 CD52P31358 61 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 GNL1P36915 607 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-205ENST00000556096 CARSP49589 748 aaKnown RBP15.52■□□□□ 0.08
VPS33B-205ENST00000556096 LPIN1Q14693 890 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 SIX1Q15475 284 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-205ENST00000556096 LRRC26Q2I0M4 334 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 GOLGA7BQ2TAP0 167 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 ADAT2Q7Z6V5 191 aaKnown RBP15.52■□□□□ 0.08
VPS33B-205ENST00000556096 UBE2Q1Q7Z7E8 422 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 ZDHHC14Q8IZN3 488 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 C12orf29Q8N999 325 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 C12orf50Q8NA57 414 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-205ENST00000556096 STK32AQ8WU08 396 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 UBXN6Q9BZV1 441 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 TRPV6Q9H1D0 765 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 SNX25Q9H3E2 840 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 TJP2Q9UDY2 1190 aa15.52■□□□□ 0.08
VPS33B-205ENST00000556096 ZSCAN5CA6NGD5 496 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 GOLGA8SH3BPF8 625 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 ARVCFO00192 962 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 RARAP10276 462 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 GHRP10912 638 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 SKIP12755 728 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 RFC1P35251 1148 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 RGS19P49795 217 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 SNX16P57768 344 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 ACAP1Q15027 740 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 SLC39A5Q6ZMH5 540 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 AGMOQ6ZNB7 445 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 GSPT2Q8IYD1 628 aaKnown RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 RCOR2Q8IZ40 523 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 MAGOHBQ96A72 148 aaKnown RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 GAD1Q99259 594 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 SEZ6LQ9BYH1 1024 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 OSBPL7Q9BZF2 842 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 TSPYL2Q9H2G4 693 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 HESX1Q9UBX0 185 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 USTQ9Y2C2 406 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 UTP11Q9Y3A2 253 aaKnown RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 A0A0U1RQF3 1178 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 MEIS3P2A8K0S8 358 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 F8VP50 259 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 TTI1O43156 1089 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 PQBP1O60828 265 aaKnown RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 FGFR1P11362 822 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 MLH1P40692 756 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 CETN2P41208 172 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 TNNT3P45378 269 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-205ENST00000556096 DR1Q01658 176 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 TRIM60Q495X7 471 aa15.51■□□□□ 0.07
VPS33B-205ENST00000556096 ZNF618Q5T7W0 954 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms