RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FAM213AQ9BRX8 229 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SMOC1Q9H4F8 434 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 THG1LQ9NWX6 298 aaKnown RBP15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GDAP2Q9NXN4 497 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TBC1D7Q9P0N9 293 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GCNT4Q9P109 453 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZMYM5Q9UJ78 669 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GTF3C4Q9UKN8 822 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 AGAP1Q9UPQ3 857 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SMC3Q9UQE7 1217 aa15.45■□□□□ 0.06
CHMP4BP1-201ENST00000556017 WDFY3Q8IZQ1 3526 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZZEF1O43149 2961 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PRPF40AO75400 957 aaKnown RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 RPP40O75818 363 aaKnown RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZNF806P0C7X5 589 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 AVPR1AP37288 418 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TFAMQ00059 246 aaKnown RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 USP4Q13107 963 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SOWAHAQ2M3V2 549 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 INTS6LQ5JSJ4 861 aaKnown RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 FAM173BQ6P4H8 233 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CEP68Q76N32 757 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 KRI1Q8N9T8 703 aaKnown RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 LOXL4Q96JB6 756 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GCNAQ96QF7 691 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ABCB6Q9NP58 842 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SEL1LQ9UBV2 794 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 STK17AQ9UEE5 414 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 MAGED2Q9UNF1 606 aaPredicted RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 NME7Q9Y5B8 376 aa15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SRPRBQ9Y5M8 271 aaKnown RBP15.44■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GOLGA8IPA6NC78 632 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GOLGA8JA6NMD2 632 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ATP2C2O75185 946 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CSH1P0DML2 217 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CSH2P0DML3 217 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 HOXD13P35453 343 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CUL4AQ13619 759 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 POSTNQ15063 836 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 NFE2Q16621 373 aaPredicted RBP15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 EML3Q32P44 896 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PLK5Q496M5 336 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 FAM171BQ6P995 826 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 LRRC52Q8N7C0 313 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GLIS3Q8NEA6 775 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 KBTBD7Q8WVZ9 684 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ZNF560Q96MR9 790 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 DUSP15Q9H1R2 295 aaPredicted RBP15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ECT2Q9H8V3 914 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 MRPL44Q9H9J2 332 aaKnown RBP15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 OLFML3Q9NRN5 406 aa15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 DDX43Q9NXZ2 648 aaKnown RBP15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TNRC6BQ9UPQ9 1833 aaKnown RBP15.43■□□□□ 0.06
CHMP4BP1-201ENST00000556017 THADAQ6YHU6 1953 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 C2orf78A6NCI8 922 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GARTP22102 1010 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 LMO2P25791 158 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PMLP29590 882 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PNPLA4P41247 253 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 FAM160A1Q05DH4 1040 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GRSF1Q12849 480 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 BFSP1Q12934 665 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 RESTQ13127 1097 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 MTF1Q14872 753 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TAF12Q16514 161 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CFAP221Q4G0U5 840 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 OR5B17Q8NGF7 314 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 OSCP1Q8WVF1 389 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 MRPS31Q92665 395 aaKnown RBP15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ACCSQ96QU6 501 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 HHIPQ96QV1 700 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 MTMR12Q9C0I1 747 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 LINC00597Q9H2U6 94 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CRTAC1Q9NQ79 661 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 RBAKQ9NYW8 714 aaPredicted RBP15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 WNT6Q9Y6F9 365 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 AKAP13Q12802 2813 aa15.42■□□□□ 0.06
CHMP4BP1-201ENST00000556017 MYO18AQ92614 2054 aaKnown RBP15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 DCLK1O15075 740 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 AKAP3O75969 853 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 GAP43P17677 238 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 DRD1P21728 446 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 USP46P62068 366 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TSPY1Q01534 308 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 PDGFRLQ15198 375 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 N4BP2L1Q5TBK1 243 aaPredicted RBP15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 LMBRD2Q68DH5 695 aaPredicted RBP15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TCEAL6Q6IPX3 200 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 SYT13Q7L8C5 426 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TMEM86AQ8N2M4 240 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CAMKK1Q8N5S9 505 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 CSGALNACT2Q8N6G5 542 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 ARL14EPQ8N8R7 260 aaPredicted RBP15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 RASSF8Q8NHQ8 419 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 RPLP0P6Q8NHW5 317 aa15.41■□□□□ 0.06
CHMP4BP1-201ENST00000556017 TCEAL3Q969E4 200 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms