RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 PDXKO00764 312 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 N4BP3O15049 544 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 CLIC2O15247 247 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 CLDN3O15551 220 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 TSPAN1O60635 241 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 TOM1L1O75674 476 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 NFICP08651 508 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ATP2A2P16615 1042 aaKnown RBP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 CCNE1P24864 410 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 MAP4P27816 1152 aaKnown RBP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ETFBP38117 255 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 GIPRP48546 466 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 STX17P56962 302 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ZNF445P59923 1031 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 TPM4P67936 248 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 LRRC63Q05C16 580 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 SLBPQ14493 270 aaKnown RBP eCLIP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 LPIN1Q14693 890 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ATF7IP2Q5U623 682 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 TWF2Q6IBS0 349 aaKnown RBP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ARMCX5Q6P1M9 558 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 NOTUMQ6P988 496 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ZPBP2Q6X784 338 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 FAM228AQ86W67 206 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 LSRQ86X29 649 aaPredicted RBP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 FAM20CQ8IXL6 584 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 KCT2Q8NC54 265 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 RBBP8NLQ8NC74 664 aaPredicted RBP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 TMEM40Q8WWA1 233 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 POMGNT1Q8WZA1 660 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 SEPT8Q92599 483 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 EZH1Q92800 747 aaPredicted RBP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 KCNN1Q92952 543 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 SCLYQ96I15 445 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 CPB2Q96IY4 423 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 CHST12Q9NRB3 414 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ANKFY1Q9P2R3 1169 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 KLHL3Q9UH77 587 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 RWDD2AQ9UIY3 292 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 PCOLCE2Q9UKZ9 415 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 PADI3Q9ULW8 664 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 ARID2Q68CP9 1835 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 MYO9BQ13459 2157 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 TRIP12Q14669 1992 aaPredicted RBP8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 CNTNAP2Q9UHC6 1331 aa8.28□□□□□ -1.08
SUPT16H-204ENST00000555943 SCN5AQ14524 2016 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 KAT6AQ92794 2004 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 WDR81Q562E7 1941 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 SLC22A31A6NKX4 558 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 SMTNL1A8MU46 457 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 GRXCR1A8MXD5 290 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 UPK3BL1B0FP48 263 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CHURC1-FNTBB4DL54 471 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 UPK3BL2E5RIL1 263 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 KIAA0391O15091 583 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CETN3O15182 167 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 B4GALT5O43286 388 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 EFCAB14O75071 495 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 LDHAP00338 332 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 PIGRP01833 764 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 HARSP12081 509 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 ARF4P18085 180 aaPredicted RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CD52P31358 61 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 FKBP3Q00688 224 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 ADAM9Q13443 819 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 EDRF1Q3B7T1 1238 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 PLA2G4EQ3MJ16 856 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 ZNF568Q3ZCX4 644 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 OVOS1Q6IE37 1185 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 MPZL3Q6UWV2 235 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 FAM43BQ6ZT52 329 aaPredicted RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 C11orf57Q6ZUT1 292 aaPredicted RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 DEFB128Q7Z7B8 93 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CREBRFQ8IUR6 639 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 MCATQ8IVS2 390 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 MRPL41Q8IXM3 137 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 HACE1Q8IYU2 909 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CSGALNACT2Q8N6G5 542 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 FAM169BQ8N8A8 192 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 ATXN2LQ8WWM7 1075 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 APBB2Q92870 758 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CCDC51Q96ER9 411 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 ACO2Q99798 780 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 FUCA2Q9BTY2 467 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 MSTO1Q9BUK6 570 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 YIPF2Q9BWQ6 316 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 FTHL17Q9BXU8 183 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 PCIF1Q9H4Z3 704 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 ERVK-5Q9HDB9 667 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 AGPAT5Q9NUQ2 364 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 GMIPQ9P107 970 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 TRAF3IP3Q9Y228 551 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 TNFSF13BQ9Y275 285 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 FRMD4BQ9Y2L6 1034 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CHD9Q3L8U1 2897 aa8.27□□□□□ -1.09
SUPT16H-204ENST00000555943 CHD7Q9P2D1 2997 aa8.26□□□□□ -1.09
SUPT16H-204ENST00000555943 A0A1B0GUA9 196 aa8.26□□□□□ -1.09
SUPT16H-204ENST00000555943 TRIM49BA6NDI0 452 aa8.26□□□□□ -1.09
SUPT16H-204ENST00000555943 ANKRD63C9JTQ0 380 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms