RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 EHD2Q9NZN4 543 aa12.67□□□□□ -0.38
VRK1-204ENST00000555351 GTF3C4Q9UKN8 822 aa12.67□□□□□ -0.38
VRK1-204ENST00000555351 DENND4CQ5VZ89 1909 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 MYBPHLA2RUH7 354 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 FAM170BA6NMN3 283 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 DPYSL4O14531 572 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 ZNF202O95125 648 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 NR3C1P04150 777 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 DCNP07585 359 aaKnown RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 PFKLP17858 780 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 CYP2F1P24903 491 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 MCCD1P59942 119 aaPredicted RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 TNNC1P63316 161 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 GRM2Q14416 872 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 ZNF268Q14587 947 aaPredicted RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 ZNF528Q3MIS6 628 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 WDR72Q3MJ13 1102 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 TMEM150AQ86TG1 271 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 MON1AQ86VX9 555 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 CELF5Q8N6W0 485 aaKnown RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 CSGALNACT1Q8TDX6 532 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 MRPS31Q92665 395 aaKnown RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 TAF4BQ92750 862 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 FAM84AQ96KN4 292 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 SNX25Q9H3E2 840 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 HEBP1Q9NRV9 189 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 THG1LQ9NWX6 298 aaKnown RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
VRK1-204ENST00000555351 FBXO4Q9UKT5 387 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
VRK1-204ENST00000555351 KIF26AQ9ULI4 1882 aaPredicted RBP12.65□□□□□ -0.38
VRK1-204ENST00000555351 PATJQ8NI35 1801 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 SHISA7A6NL88 538 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 PHACTR2O75167 634 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 C4BPAP04003 597 aaKnown RBP12.65□□□□□ -0.38
VRK1-204ENST00000555351 P4HA1P13674 534 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 LMO2P25791 158 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 RPL13P26373 211 aaKnown RBP12.65□□□□□ -0.38
VRK1-204ENST00000555351 GNL1P36915 607 aaPredicted RBP12.65□□□□□ -0.38
VRK1-204ENST00000555351 UBXN2BQ14CS0 331 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 STXBP5Q5T5C0 1151 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 ZC3H14Q6PJT7 736 aaKnown RBP12.65□□□□□ -0.38
VRK1-204ENST00000555351 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 RSPRY1Q96DX4 576 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 SLC46A2Q9BY10 475 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 PIAS3Q9Y6X2 628 aa12.65□□□□□ -0.38
VRK1-204ENST00000555351 NCANO14594 1321 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 TICRRQ7Z2Z1 1910 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 OBSL1O75147 1896 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 SLC38A8A6NNN8 435 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 TRIM66O15016 1216 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 GFRA3O60609 400 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 TARSP26639 723 aaKnown RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 AVPR1AP37288 418 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 PPP3CCP48454 512 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 PDE6CP51160 858 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 MYL6P60660 151 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 NOP14P78316 857 aaKnown RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 FZD5Q13467 585 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 NCOA4Q13772 614 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 DDR2Q16832 855 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 SGSM1Q2NKQ1 1148 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 ZACNQ401N2 412 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 COBLL1Q53SF7 1204 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 INTS8Q75QN2 995 aaKnown RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 RALGPS2Q86X27 583 aaPredicted RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 ELOA2Q8IYF1 753 aaPredicted RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 PLEKHO2Q8TD55 490 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 NKD2Q969F2 451 aaPredicted RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 CHAMP1Q96JM3 812 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 C8orf48Q96LL4 319 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 ELOVL4Q9GZR5 314 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 TDP1Q9NUW8 608 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 RMND1Q9NWS8 449 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 MTF2Q9Y483 593 aaPredicted RBP12.64□□□□□ -0.39
VRK1-204ENST00000555351 PTPRDP23468 1912 aa12.64□□□□□ -0.39
VRK1-204ENST00000555351 GOLGA6L4A6NEF3 574 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 PRR23AA6NEV1 266 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 LAMTOR5O43504 91 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 ATP2C2O75185 946 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms