RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 ATP9AO75110 1047 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 TCEA3O75764 348 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 OATP04181 439 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 SUPT20HL2P0C7V6 817 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PTGIRP43119 386 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 MYL6P60660 151 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 KPNB1Q14974 876 aaKnown RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 KCNT1Q5JUK3 1230 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PID1Q7Z2X4 250 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 RASSF3Q86WH2 238 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 FAM71DQ8N9W8 422 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 HIPK4Q8NE63 616 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 FBXO36Q8NEA4 188 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PIK3R5Q8WYR1 880 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 SEMA4DQ92854 862 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 APBB2Q92870 758 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CFAP36Q96G28 342 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 MFSD14AQ96MC6 490 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 NT5C1AQ9BXI3 368 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 GCOM2Q9BZD3 368 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 VPS33BQ9H267 617 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 NOCTQ9UK39 431 aaKnown RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 AGAP1Q9UPQ3 857 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 RGPD2P0DJD1 1756 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 F8VP50 259 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 APOC4-APOC2K7ER74 178 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 MAGEB2O15479 319 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 HSPA4LO95757 839 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 APOC2P02655 101 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 TAC1P20366 129 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 BACE1P56817 501 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PTPN11Q06124 597 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 NXNQ6DKJ4 435 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 SPOPLQ6IQ16 392 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PLEKHA7Q6IQ23 1121 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CATSPER4Q7RTX7 472 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PIP4K2CQ8TBX8 421 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 SLC26A7Q8TE54 656 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CMTM5Q96DZ9 223 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 TBCBQ99426 244 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 MRGBPQ9NV56 204 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PIM2Q9P1W9 311 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 KLHL8Q9P2G9 620 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 MARCOQ9UEW3 520 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 SNED1Q8TER0 1413 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 ZNF189O75820 626 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 ASS1P00966 412 aaKnown RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 CREB1P16220 341 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 TAL1P17542 331 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 SSTR3P32745 418 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 ARL1P40616 181 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 SESN2P58004 480 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 RPL7AP62424 266 aaKnown RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 CXCL9Q07325 125 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 RCN1Q15293 331 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 KYAT1Q16773 422 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 TAF1BQ53T94 588 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 MTHFD1LQ6UB35 978 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 RAPH1Q70E73 1250 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 KIRREL3Q8IZU9 778 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 MIPOL1Q8TD10 442 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 DEPDC1BQ8WUY9 529 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 SH3GL3Q99963 347 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CENPKQ9BS16 269 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 SNX25Q9H3E2 840 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CYP3A43Q9HB55 503 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 THEGQ9P2T0 379 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 NUB1Q9Y5A7 615 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 MYH7BA7E2Y1 1941 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 RPTORQ8N122 1335 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PHRF1Q9P1Y6 1649 aaKnown RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 TMEM191CA6NGB0 347 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 H3BRJ5 948 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PPP1R12AO14974 1030 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 CBX6O95503 412 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CYP2C8P10632 490 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 MYL4P12829 197 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 TSHRP16473 764 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 OSBPP22059 807 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 GRK2P25098 689 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 RFC1P35251 1148 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 ELK3P41970 407 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 IFRD2Q12894 506 aaPredicted RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 MAMLD1Q13495 774 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 ART3Q13508 389 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PGM5Q15124 567 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 ATP13A4Q4VNC1 1196 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 WDR49Q8IV35 697 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 EMC1Q8N766 993 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CHST13Q8NET6 341 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 IL31RAQ8NI17 732 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 TEKT4Q8WW24 435 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 LRGUKQ96M69 825 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 PXMP2Q9NR77 195 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 NDUFA13Q9P0J0 144 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 CTNNAL1Q9UBT7 734 aa4.07□□□□□ -1.76
KTN1-217ENST00000554831 R3HDM2Q9Y2K5 976 aaKnown RBP4.07□□□□□ -1.76
KTN1-217ENST00000554831 CEP290O15078 2479 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 LOC100653049A0A140TA62 436 aa4.06□□□□□ -1.76
KTN1-217ENST00000554831 APOL1O14791 398 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms