RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 KIFC3Q9BVG8 833 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 GAREM1Q9H706 876 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 ZSWIM4Q9H7M6 989 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 CPNE5Q9HCH3 593 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 ZSWIM6Q9HCJ5 1215 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 TRPC7Q9HCX4 862 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 CD93Q9NPY3 652 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 TM7SF3Q9NS93 570 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 SLC38A7Q9NVC3 462 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 CALCOCO1Q9P1Z2 691 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 IL17BQ9UHF5 180 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 SRPK3Q9UPE1 567 aa7.4□□□□□ -1.22
LIN7A-202ENST00000549417 MYO18AQ92614 2054 aaKnown RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 IGHV1OR15-9A0A0B4J2B8 117 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 A0A1W2PQD8 194 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 SLC27A2O14975 620 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 CILPO75339 1184 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 GSPT1P15170 499 aaKnown RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 ADSSP30520 456 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 YARSP54577 528 aaKnown RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 NLRP5P59047 1200 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 MRPS21P82921 87 aaKnown RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 KDSRQ06136 332 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 KCNH2Q12809 1159 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 HDAC1Q13547 482 aaPredicted RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 VEPH1Q14D04 833 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 SMAD1Q15797 465 aaKnown RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 INF2Q27J81 1249 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 SLC39A12Q504Y0 691 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 C6orf118Q5T5N4 469 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 NT5DC1Q5TFE4 455 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 ATF7IP2Q5U623 682 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 ALKAL1Q6UXT8 129 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 SLC36A4Q6YBV0 504 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 USP37Q86T82 979 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 SPACA3Q8IXA5 215 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 CCDC26Q8TAB7 109 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 PIGOQ8TEQ8 1089 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 BAP1Q92560 729 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 SLC22A12Q96S37 553 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 CDC6Q99741 560 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 CCDC113Q9H0I3 377 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 MIR1-1HGQ9H1L0 117 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 POLD4Q9HCU8 107 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 TUBGCP4Q9UGJ1 667 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 MAGED2Q9UNF1 606 aaPredicted RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 ANKRD17O75179 2603 aaKnown RBP7.39□□□□□ -1.23
LIN7A-202ENST00000549417 KNTC1P50748 2209 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 MYLKQ15746 1914 aa7.39□□□□□ -1.23
LIN7A-202ENST00000549417 SPTAN1Q13813 2472 aaKnown RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 ACKR2O00590 384 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 SCAMP3O14828 347 aaKnown RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 SGSM2O43147 1006 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 SLITRK3O94933 977 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 OAZ2O95190 189 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 F11P03951 625 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 HARSP12081 509 aaKnown RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 JUPP14923 745 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 GNSP15586 552 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 GABRG2P18507 467 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 RPL9P32969 192 aaKnown RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 WASP42768 502 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 NLRP12P59046 1061 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 AKAP17AQ02040 695 aaKnown RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 SPAG1Q07617 926 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 SCRN1Q12765 414 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 NR1H3Q13133 447 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 DMP1Q13316 513 aaPredicted RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 ZNF77Q15935 545 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 GAB4Q2WGN9 574 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 HLA-BQ31612 363 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 PREPLQ4J6C6 727 aaPredicted RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 ZC2HC1CQ53FD0 456 aaPredicted RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 EOGTQ5NDL2 527 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 ZCCHC9Q8N567 271 aaKnown RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 CCDC148Q8NFR7 591 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 HAS1Q92839 578 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 YTHDC1Q96MU7 727 aaKnown RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 MFRPQ9BY79 579 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 SLC6A17Q9H1V8 727 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 FAM124BQ9H5Z6 455 aaPredicted RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 KIF9Q9HAQ2 790 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 KCNMB3Q9NPA1 279 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 TOPORSQ9NS56 1045 aaPredicted RBP7.38□□□□□ -1.23
LIN7A-202ENST00000549417 GMIPQ9P107 970 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 ANKMY1Q9P2S6 941 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 PAXBP1Q9Y5B6 917 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 MYOFQ9NZM1 2061 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 CITO14578 2027 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 ANK1P16157 1881 aa7.38□□□□□ -1.23
LIN7A-202ENST00000549417 TMEM131Q92545 1883 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 OR6C75A6NL08 312 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 MEI4A8MW99 385 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 BTBD18B2RXH4 712 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 E9PAM4 449 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 M0QZQ0 153 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 PRPF3O43395 683 aaKnown RBP7.37□□□□□ -1.23
LIN7A-202ENST00000549417 TNFSF14O43557 240 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 BRINP1O60477 761 aa7.37□□□□□ -1.23
LIN7A-202ENST00000549417 NDUFS2O75306 463 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms