RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 PPM1JQ5JR12 505 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 KBTBD6Q86V97 674 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 METTL23Q86XA0 190 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 DCP1BQ8IZD4 617 aaKnown RBP13.51□□□□□ -0.25
COPS7A-221ENST00000546229 THEM5Q8N1Q8 247 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 KBTBD7Q8WVZ9 684 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 GCNAQ96QF7 691 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 ACBD6Q9BR61 282 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 FAM213AQ9BRX8 229 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 PI4K2AQ9BTU6 479 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 NME7Q9Y5B8 376 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 SDK1Q7Z5N4 2213 aa13.51□□□□□ -0.25
COPS7A-221ENST00000546229 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
COPS7A-221ENST00000546229 RNF40O75150 1001 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 AKAP3O75969 853 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 CSH1P0DML2 217 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 CSH2P0DML3 217 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 TCF3P15923 654 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 GAP43P17677 238 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 GARTP22102 1010 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 GJA4P35212 333 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 HOXD13P35453 343 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 NFE2Q16621 373 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-221ENST00000546229 DDR2Q16832 855 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 SOWAHAQ2M3V2 549 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 EML3Q32P44 896 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 FAM173BQ6P4H8 233 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 FAM171BQ6P995 826 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 TMEM86AQ8N2M4 240 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 KRI1Q8N9T8 703 aaKnown RBP13.5□□□□□ -0.25
COPS7A-221ENST00000546229 LOXL4Q96JB6 756 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 ZC3H10Q96K80 434 aaKnown RBP13.5□□□□□ -0.25
COPS7A-221ENST00000546229 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-221ENST00000546229 DDX43Q9NXZ2 648 aaKnown RBP13.5□□□□□ -0.25
COPS7A-221ENST00000546229 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-221ENST00000546229 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 ITGA11Q9UKX5 1188 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 AGAP1Q9UPQ3 857 aa13.5□□□□□ -0.25
COPS7A-221ENST00000546229 ANTXRLA6NF34 631 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 PRPF40AO75400 957 aaKnown RBP13.49□□□□□ -0.25
COPS7A-221ENST00000546229 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
COPS7A-221ENST00000546229 ZNF806P0C7X5 589 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 AVPR1AP37288 418 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
COPS7A-221ENST00000546229 TSPY1Q01534 308 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 MTF1Q14872 753 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 POSTNQ15063 836 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 TOP6BLQ8N6T0 577 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 OR5B17Q8NGF7 314 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 OSCP1Q8WVF1 389 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 FUBP3Q96I24 572 aaKnown RBP eCLIP13.49□□□□□ -0.25
COPS7A-221ENST00000546229 ACCSQ96QU6 501 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 MRPL44Q9H9J2 332 aaKnown RBP13.49□□□□□ -0.25
COPS7A-221ENST00000546229 PDE11AQ9HCR9 933 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 CRTAC1Q9NQ79 661 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 TMEM30AQ9NV96 361 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
COPS7A-221ENST00000546229 GTF3C4Q9UKN8 822 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
COPS7A-221ENST00000546229 PLXND1Q9Y4D7 1925 aa13.49□□□□□ -0.25
COPS7A-221ENST00000546229 GOLGA8IPA6NC78 632 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 C2orf78A6NCI8 922 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 GOLGA8JA6NMD2 632 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 ATP2C2O75185 946 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 GCNT3O95395 438 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 PMLP29590 882 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 MAGEA11P43364 429 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 GALK1P51570 392 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 USP46P62068 366 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
COPS7A-221ENST00000546229 PDGFRLQ15198 375 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 CCDC6Q16204 474 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 E2F4Q16254 413 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 PLK5Q496M5 336 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
COPS7A-221ENST00000546229 ADGRF2Q8IZF7 708 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 RASSF8Q8NHQ8 419 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 MRPS31Q92665 395 aaKnown RBP13.48□□□□□ -0.25
COPS7A-221ENST00000546229 HHIPQ96QV1 700 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 CYP2S1Q96SQ9 504 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 MAGED2Q9UNF1 606 aaPredicted RBP13.48□□□□□ -0.25
COPS7A-221ENST00000546229 WNT6Q9Y6F9 365 aa13.48□□□□□ -0.25
COPS7A-221ENST00000546229 NUP205Q92621 2012 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 AKAP13Q12802 2813 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-221ENST00000546229 FOXD2O60548 495 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-221ENST00000546229 OLFM2O95897 454 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 DRD1P21728 446 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 LMO2P25791 158 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 OPRD1P41143 372 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms