RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 NCAPHQ15003 741 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 MS4A14Q96JA4 679 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 SYT15Q9BQS2 421 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 CASS4Q9NQ75 786 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 HIST1H2AGP0C0S8 130 aaPredicted RBP9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 HIST1H2ADP20671 130 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 PTK2BQ14289 1009 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 SLC39A12Q504Y0 691 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 FIBCD1Q8N539 461 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 USP13Q92995 863 aaPredicted RBP9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 TSPAN17Q96FV3 270 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 HIST1H2AHQ96KK5 128 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 HIST1H2AJQ99878 128 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 H2AFJQ9BTM1 129 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 CYP3A43Q9HB55 503 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 RAB6BQ9NRW1 208 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 SNCAIPQ9Y6H5 919 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 FAM47DPA6NHR8 397 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 KDM1AO60341 852 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 SLITRK3O94933 977 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 RHOCP08134 193 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 OXCT1P55809 520 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 CCNYL1Q8N7R7 359 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 NCLNQ969V3 563 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 ACSF2Q96CM8 615 aaPredicted RBP9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 SMARCD1Q96GM5 515 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 FTHL17Q9BXU8 183 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 DDX47Q9H0S4 455 aaKnown RBP9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 FBXO44Q9H4M3 255 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 COG4Q9H9E3 785 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 NFASCO94856 1347 aa9.44□□□□□ -0.9
MTHFD1-202ENST00000545908 DDHD2O94830 711 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 MLH1P40692 756 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 CDR2Q01850 454 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 MUM1Q2TAK8 710 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 TIGD7Q6NT04 549 aaPredicted RBP9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 UNC45BQ8IWX7 931 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 DDIASQ8IXT1 998 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 TMC2Q8TDI7 906 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 EPHB2P29323 1055 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 SLC12A3P55017 1021 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 SLFN11Q7Z7L1 901 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 SPDL1Q96EA4 605 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 SPATA16Q9BXB7 569 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 C20orf96Q9NUD7 363 aaPredicted RBP9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 UMODL1Q5DID0 1318 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 MICAL2O94851 1124 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 CYP3A4P08684 503 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 TKTL1P51854 596 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 CHP1Q99653 195 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 NFKBIZQ9BYH8 718 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 BCL9LQ86UU0 1499 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 SPATS2Q86XZ4 545 aaKnown RBP9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 C7orf61Q8IZ16 206 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 SPATA18Q8TC71 538 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 XPO6Q96QU8 1125 aaKnown RBP9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 ZNF197O14709 1029 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 CFLARO15519 480 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 GRK4P32298 578 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 PPP3CCP48454 512 aa9.43□□□□□ -0.9
MTHFD1-202ENST00000545908 HMGB1P1B2RPK0 211 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 TSPAN3O60637 253 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 NUMBP49757 651 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 NFE2Q16621 373 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 ANKRD20A4Q4UJ75 823 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 ANKRD20A8PQ5CZ79 823 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 ANKRD20A2Q5SQ80 823 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 ANKRD20A1Q5TYW2 823 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 PALB2Q86YC2 1186 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 GSPT2Q8IYD1 628 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 ABCB6Q9NP58 842 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 AIPL1Q9NZN9 384 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 TRIM33Q9UPN9 1127 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 SUPT3HB4E1H0 165 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 SUPT3HO75486 399 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 RARRES1P49788 294 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 SESN3P58005 492 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 TUBB6Q9BUF5 446 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 VPS28Q9UK41 221 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 BARX2Q9UMQ3 279 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 SSU72P8A0A1W2PR75 194 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 MMP3P08254 477 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 COMTP21964 271 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 TYK2P29597 1187 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 HELQQ8TDG4 1101 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 GAS2L1Q99501 681 aaPredicted RBP9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 CIPCQ9C0C6 399 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 Q9H521 79 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 CISHQ9NSE2 258 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 CD274Q9NZQ7 290 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 SENP1Q9P0U3 644 aa9.42□□□□□ -0.9
MTHFD1-202ENST00000545908 PAK5Q9P286 719 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms