RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TTC16Q8NEE8 873 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 ZSWIM2Q8NEG5 633 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 PCIF1Q9H4Z3 704 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 PDE11AQ9HCR9 933 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 TRPC7Q9HCX4 862 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 C2orf42Q9NWW7 574 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 GTF3C4Q9UKN8 822 aa18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 NUP210Q8TEM1 1887 aaPredicted RBP18.69■□□□□ 0.58
PPP1CA-210ENST00000542876 SPTBN2O15020 2390 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 TRDMT1O14717 391 aaKnown RBP18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 NOL4O94818 638 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 TNNC2P02585 160 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 CKMP06732 381 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 DRD1P21728 446 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 FAM160A1Q05DH4 1040 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 CFAP221Q4G0U5 840 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 C4orf50Q6ZRC1 276 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 SCN4BQ8IWT1 228 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 CPA6Q8N4T0 437 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 FAM160A2Q8N612 972 aaPredicted RBP18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 TRMT2BQ96GJ1 504 aaKnown RBP18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 FUBP3Q96I24 572 aaKnown RBP eCLIP18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 MYRFLQ96LU7 910 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 MTMR12Q9C0I1 747 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 LRRC27Q9C0I9 530 aa18.68■□□□□ 0.58
PPP1CA-210ENST00000542876 TRAV19A0A0A6YYK7 116 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 CCDC163A0A0D9SF12 145 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 FRMD3A2A2Y4 597 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 SLC30A4O14863 429 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 RPP40O75818 363 aaKnown RBP18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 PRPF6O94906 941 aaKnown RBP18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 USP17L7P0C7H9 530 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 CCDC192P0DO97 292 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 ARSAP15289 507 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 MTF1Q14872 753 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 SLC39A14Q15043 492 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 SURF1Q15526 300 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 FSTL4Q6MZW2 842 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 DPH6Q7L8W6 267 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 CACNA2D4Q7Z3S7 1137 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 P2RY13Q9BPV8 354 aa18.67■□□□□ 0.58
PPP1CA-210ENST00000542876 OTOL1A6NHN0 477 aaPredicted RBP18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 ZNF233A6NK53 670 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 RNF40O75150 1001 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 IFNAR2P48551 515 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 PXNP49023 591 aaPredicted RBP18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 FBXO43Q4G163 708 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 OSTM1Q86WC4 334 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 PDILTQ8N807 584 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 CXorf38Q8TB03 319 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 GAB3Q8WWW8 586 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 HPDLQ96IR7 371 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 LOXL4Q96JB6 756 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 ZSCAN16Q9H4T2 348 aaPredicted RBP18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 INTS13Q9NVM9 706 aa18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 DUS2Q9NX74 493 aaKnown RBP18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 MAGEC2Q9UBF1 373 aaPredicted RBP18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
PPP1CA-210ENST00000542876 ANK1P16157 1881 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 GABRDO14764 452 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 AXIN1O15169 862 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 EGFP01133 1207 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 MAGEA11P43364 429 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 PDE6CP51160 858 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 GALK1P51570 392 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 NR1H3Q13133 447 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 KCNB1Q14721 858 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 STK38Q15208 465 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 MAPRE1Q15691 268 aaKnown RBP18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 DUOXA2Q1HG44 320 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 SOWAHAQ2M3V2 549 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 AASDHQ4L235 1098 aaPredicted RBP18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 LMBRD2Q68DH5 695 aaPredicted RBP18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 PKN3Q6P5Z2 889 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 CAMKK1Q8N5S9 505 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 C12orf50Q8NA57 414 aaPredicted RBP18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 OSCP1Q8WVF1 389 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 ATP2A3Q93084 1043 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 FAM84AQ96KN4 292 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 PKMYT1Q99640 499 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 SYT15Q9BQS2 421 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 FGFBP2Q9BYJ0 223 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 ECT2Q9H8V3 914 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 KIAA1586Q9HCI6 787 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 SIX4Q9UIU6 781 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 CDH9Q9ULB4 789 aa18.65■□□□□ 0.58
PPP1CA-210ENST00000542876 TCHHQ07283 1943 aa18.64■□□□□ 0.58
PPP1CA-210ENST00000542876 TADA3O75528 432 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 GJA4P35212 333 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 AMPD3Q01432 767 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 PPM1JQ5JR12 505 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 IL31Q6EBC2 164 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 VSTM1Q6UX27 236 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 DDX1Q92499 740 aaKnown RBP18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 CHFRQ96EP1 664 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 INTS4Q96HW7 963 aaKnown RBP18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 CNTNAP3BQ96NU0 1288 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 CYP2S1Q96SQ9 504 aa18.64■□□□□ 0.57
PPP1CA-210ENST00000542876 MMS19Q96T76 1030 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms