RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 HMGA1P17096 107 aaKnown RBP19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 BDNFP23560 247 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 CYP27A1Q02318 531 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 ORC1Q13415 861 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 TEAD2Q15562 447 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 STXBP5Q5T5C0 1151 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 FRMD5Q7Z6J6 570 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 ITIH5Q86UX2 942 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 B3GALNT2Q8NCR0 500 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 FBXL13Q8NEE6 735 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 ASIC4Q96FT7 647 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 FUBP3Q96I24 572 aaKnown RBP eCLIP19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 SRRTQ9BXP5 876 aaKnown RBP19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 RAB20Q9NX57 234 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 GDE1Q9NZC3 331 aa19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 MAGEC2Q9UBF1 373 aaPredicted RBP19.52■□□□□ 0.72
SNRPA1-203ENST00000540017 PTPRDP23468 1912 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 CLDN5O00501 218 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 STX10O60499 249 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 P4HA1P13674 534 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 GABRR2P28476 465 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 MAGEA11P43364 429 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 NDST1P52848 882 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 CACNA2D1P54289 1103 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 SIGLEC14Q08ET2 396 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 VEPH1Q14D04 833 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 MAPRE1Q15691 268 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 CCDC40Q4G0X9 1142 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 C4orf50Q6ZRC1 276 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 SCN4BQ8IWT1 228 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 UBALD2Q8IYN6 164 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 TATDN2Q93075 761 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 NXPE3Q969Y0 559 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 KXD1Q9BQD3 176 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 B3GNT5Q9BYG0 378 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 IMPG2Q9BZV3 1241 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 METTL14Q9HCE5 456 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 TMEM30AQ9NV96 361 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 RWDD2AQ9UIY3 292 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 COQ4Q9Y3A0 265 aa19.51■□□□□ 0.71
SNRPA1-203ENST00000540017 TMEM221A6NGB7 291 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 M0R296 226 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 FCARP24071 287 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 RPL10AP62906 217 aaKnown RBP19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 DPCR1Q3MIW9 517 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 FAM78AQ5JUQ0 283 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 TANGO2Q6ICL3 276 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 HFE2Q6ZVN8 426 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 PAQR9Q6ZVX9 377 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 TMEM150AQ86TG1 271 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 ACOT1Q86TX2 421 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 MLKLQ8NB16 471 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 TWNKQ96RR1 684 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 PLA2G2FQ9BZM2 168 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 ZNF518BQ9C0D4 1074 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 NIF3L1Q9GZT8 377 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 DUSP12Q9UNI6 340 aa19.5■□□□□ 0.71
SNRPA1-203ENST00000540017 SLC38A8A6NNN8 435 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 PRR33A8MZF0 331 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 FMO5P49326 533 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 CYP4F8P98187 520 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 MTSS1LQ765P7 747 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 TRIM59Q8IWR1 403 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 WHAMMQ8TF30 809 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 ASB16Q96NS5 453 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 ATXN3LQ9H3M9 355 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 MAGED2Q9UNF1 606 aaPredicted RBP19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 NCANO14594 1321 aa19.49■□□□□ 0.71
SNRPA1-203ENST00000540017 PDGFBP01127 241 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 F11P03951 625 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 CSH1P0DML2 217 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 CSH2P0DML3 217 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 GRIK1P39086 918 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 MARSP56192 900 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 NLRP12P59046 1061 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 INCA1Q0VD86 236 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 TAF12Q16514 161 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 VSTM1Q6UX27 236 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 GPIHBP1Q8IV16 184 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 CRYBG2Q8N1P7 616 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 TNIP3Q96KP6 325 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 ARID3AQ99856 593 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 CYP3A43Q9HB55 503 aa19.48■□□□□ 0.71
SNRPA1-203ENST00000540017 F8VP50 259 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 GOLGA6L22H0YM25 854 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 TADA3O75528 432 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 NOL4O94818 638 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 CD58P19256 250 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 VIPR2P41587 438 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 GPR158Q5T848 1215 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 RBM43Q6ZSC3 357 aaKnown RBP19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 UNC93AQ86WB7 457 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 IRF2BP1Q8IU81 584 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 FUKQ8N0W3 1084 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 C12orf29Q8N999 325 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 CCDC150Q8NCX0 1101 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 ZSCAN18Q8TBC5 510 aaPredicted RBP19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 SMARCD2Q92925 531 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 RSPRY1Q96DX4 576 aa19.47■□□□□ 0.71
SNRPA1-203ENST00000540017 MYRFLQ96LU7 910 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms