RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
DDB1-209ENST00000537877 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 TTC30AQ86WT1 665 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 ANKRD52Q8NB46 1076 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 SLC35G2Q8TBE7 412 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 HERVK_113Q902F9 699 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 ZNF558Q96NG5 402 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 WDR24Q96S15 920 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 SLC9A7Q96T83 725 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
DDB1-209ENST00000537877 RTP3Q9BQQ7 232 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.07□□□□□ -0.326e-8■□□□□ 9.7
DDB1-209ENST00000537877 CRTAC1Q9NQ79 661 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 CYLDQ9NQC7 956 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 WDR35Q9P2L0 1181 aa13.07□□□□□ -0.32
DDB1-209ENST00000537877 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
DDB1-209ENST00000537877 OAZ2O95190 189 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 GJB5O95377 273 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 FGFR3P22607 806 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 RRM1P23921 792 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 ADORA2BP29275 332 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 GABRB2P47870 512 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 SLC8A3P57103 927 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
DDB1-209ENST00000537877 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 PTPN20Q4JDL3 420 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 SPOUT1Q5T280 376 aaKnown RBP13.06□□□□□ -0.32
DDB1-209ENST00000537877 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 PLEKHA7Q6IQ23 1121 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 ZNF280DQ6N043 979 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 FAM35AQ86V20 835 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 FUKQ8N0W3 1084 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 C3orf20Q8ND61 904 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 TPCN2Q8NHX9 752 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 MYCBPAPQ8TBZ2 947 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 ZNF564Q8TBZ8 553 aaPredicted RBP13.06□□□□□ -0.32
DDB1-209ENST00000537877 SLC2A14Q8TDB8 520 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 ZNF592Q92610 1267 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 NAPGQ99747 312 aaPredicted RBP13.06□□□□□ -0.32
DDB1-209ENST00000537877 NUP85Q9BW27 656 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 OXCT2Q9BYC2 517 aaPredicted RBP13.06□□□□□ -0.32
DDB1-209ENST00000537877 MRPL47Q9HD33 250 aaKnown RBP13.06□□□□□ -0.32
DDB1-209ENST00000537877 CYTH4Q9UIA0 394 aa13.06□□□□□ -0.32
DDB1-209ENST00000537877 VWA8A3KMH1 1905 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 KIAA1671Q9BY89 1806 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 GRID2IPA4D2P6 1211 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 CTAGE9A4FU28 777 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 OR6C75A6NL08 312 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
DDB1-209ENST00000537877 ATP2C2O75185 946 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 EFEMP2O95967 443 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 FAM200BP0CF97 657 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 NPR3P17342 541 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 SYN1P17600 705 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 PLA2G4AP47712 749 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 EPHB4P54760 987 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 TAP1Q03518 808 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 PDE4CQ08493 712 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
DDB1-209ENST00000537877 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
DDB1-209ENST00000537877 FAM171A1Q5VUB5 890 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 C11orf63Q6NUN7 778 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 FAM117BQ6P1L5 589 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 FAM171BQ6P995 826 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
DDB1-209ENST00000537877 SLC39A11Q8N1S5 342 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 LRRC57Q8N9N7 239 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 OR10T2Q8NGX3 314 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 UBA3Q8TBC4 463 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 PHOSPHO2Q8TCD6 241 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 SLC35F5Q8WV83 523 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 UBE2Q2Q8WVN8 375 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 C18orf8Q96DM3 657 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 PCED1BQ96HM7 432 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 IGSF21Q96ID5 467 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 CPXM1Q96SM3 734 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 PKMYT1Q99640 499 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 MED10Q9BTT4 135 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 DUSP16Q9BY84 665 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 GPR62Q9BZJ7 368 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 SYNCQ9H7C4 482 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 OSGEPQ9NPF4 335 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 PARVAQ9NVD7 372 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 LCMT1Q9UIC8 334 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
DDB1-209ENST00000537877 COG5Q9UP83 839 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 JRKLQ9Y4A0 524 aa13.05□□□□□ -0.32
DDB1-209ENST00000537877 MRPL42Q9Y6G3 142 aaKnown RBP13.05□□□□□ -0.32
DDB1-209ENST00000537877 TCRBV5S1A1TA0A578 114 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 FAM170AA1A519 330 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 MYBPHLA2RUH7 354 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 NT5C1B-RDH14C9J2C7 533 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 H7C4K7 107 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 PALMO75781 387 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 PPM1AP35813 382 aa13.04□□□□□ -0.32
DDB1-209ENST00000537877 PBX3P40426 434 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms