RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 PAX7P23759 505 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 IL1R2P27930 398 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 CYP4F22Q6NT55 531 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 SYDE1Q6ZW31 735 aaPredicted RBP13.55□□□□□ -0.24
TRIM25-202ENST00000537230 KLHL29Q96CT2 875 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 CPXM1Q96SM3 734 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 ZNF148Q9UQR1 794 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 STK38LQ9Y2H1 464 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 LSM8O95777 96 aaKnown RBP13.55□□□□□ -0.24
TRIM25-202ENST00000537230 KRT16P08779 473 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 DYNLT1P63172 113 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 LACTBP83111 547 aaPredicted RBP13.55□□□□□ -0.24
TRIM25-202ENST00000537230 RCOR2Q8IZ40 523 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 CCDC89Q8N998 374 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 CDCA5Q96FF9 252 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 TMEM121Q9BTD3 319 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
TRIM25-202ENST00000537230 A0A087WZ62 844 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 A0A1B0GUA9 196 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 LACTBL1A8MY62 500 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 B4GALT4O60513 344 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 SUN1O94901 812 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 C22orf31O95567 290 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 SLC25A27O95847 323 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 VTNP04004 478 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 ITGB3P05106 788 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 CD48P09326 243 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 INSRRP14616 1297 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 CDH5P33151 784 aaPredicted RBP13.54□□□□□ -0.24
TRIM25-202ENST00000537230 GJA5P36382 358 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 CDKN2BP42772 138 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 RAD23BP54727 409 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 ANKRD13AQ8IZ07 590 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 FITM2Q8N6M3 262 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 RBM15Q96T37 977 aaKnown RBP eCLIP13.54□□□□□ -0.243e-7■■■■■ 33.2
TRIM25-202ENST00000537230 FDXACB1Q9BRP7 624 aaPredicted RBP13.54□□□□□ -0.24
TRIM25-202ENST00000537230 C2orf40Q9H1Z8 148 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 ZWILCHQ9H900 591 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 hCG_1818297A0A087WSY0 165 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 TNNC2P02585 160 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 EIF4BP23588 611 aaKnown RBP13.54□□□□□ -0.24
TRIM25-202ENST00000537230 CDC25CP30307 473 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 GAD2Q05329 585 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 CRYMQ14894 314 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 TAF5Q15542 800 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 JADE1Q6IE81 842 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 CXorf38Q8TB03 319 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 RSRC1Q96IZ7 334 aaKnown RBP13.54□□□□□ -0.24
TRIM25-202ENST00000537230 RMDN2Q96LZ7 410 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 ROPN1BQ9BZX4 212 aaPredicted RBP13.54□□□□□ -0.24
TRIM25-202ENST00000537230 ROPN1Q9HAT0 212 aaPredicted RBP13.54□□□□□ -0.24
TRIM25-202ENST00000537230 PCDHGC3Q9UN70 934 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 C15orf41Q9Y2V0 281 aa13.54□□□□□ -0.24
TRIM25-202ENST00000537230 C3orf70A6NLC5 250 aaPredicted RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 PIK3R2O00459 728 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 CXCL11O14625 94 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 LRCH4O75427 683 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 BANF1O75531 89 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 SKAP2O75563 359 aaPredicted RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 ZNF286BP0CG31 522 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 ARSEP51690 589 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 BNIP1Q12981 228 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 MTM1Q13496 603 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 RAB6CQ53S08 254 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 CAPN12Q6ZSI9 719 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 TAB3Q8N5C8 712 aaPredicted RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 ANKRD36BP1Q96IX9 119 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 RAB6CQ9H0N0 254 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 SMARCAD1Q9H4L7 1026 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 SCN1AP35498 2009 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 GAS2O43903 313 aaKnown RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 STAG3L1P0CL83 205 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 COPS2P61201 443 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 GPS1Q13098 491 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 OASLQ15646 514 aaKnown RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 AMHR2Q16671 573 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 SPATA21Q7Z572 469 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 SLC4A11Q8NBS3 891 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 RBM41Q96IZ5 413 aaKnown RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 ADAM33Q9BZ11 813 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
TRIM25-202ENST00000537230 HBP1O60381 514 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 DIAPH2O60879 1101 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 TJP3O95049 919 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 IFNB1P01574 187 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 ERBB2P04626 1255 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 KRT3P12035 628 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 BRAFP15056 766 aa13.53□□□□□ -0.24
TRIM25-202ENST00000537230 PECAM1P16284 738 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms