RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 USP34Q70CQ2 3546 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 STK25O00506 426 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 VNN1O95497 513 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 FGF19O95750 216 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NR2F2P24468 414 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ATICP31939 592 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CYP4F8P98187 520 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 BIRC3Q13489 604 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 STIM1Q13586 685 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MORC3Q14149 939 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MLF2Q15773 248 aaPredicted RBP19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 DDR2Q16832 855 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ZCWPW2Q504Y3 356 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 RBM43Q6ZSC3 357 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TMC2Q8TDI7 906 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 RSPRY1Q96DX4 576 aa19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 FUBP3Q96I24 572 aaKnown RBP eCLIP19.1■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PATJQ8NI35 1801 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MAPK13O15264 365 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PHACTR2O75167 634 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 AKAP3O75969 853 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PDGFRBP09619 1106 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 FAM163BP0C2L3 166 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PSMC3P17980 439 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 CDC25CP30307 473 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 PPP1R2P41236 205 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TNNC1P63316 161 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NCOA4Q13772 614 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TAF12Q16514 161 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ZACNQ401N2 412 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 GPR158Q5T848 1215 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TMEM150AQ86TG1 271 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 SPATA2LQ8IUW3 424 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ARID3BQ8IVW6 561 aaPredicted RBP19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 MYLPFQ96A32 169 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 ELMO3Q96BJ8 720 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 DDX23Q9BUQ8 820 aaKnown RBP19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 TRMT61BQ9BVS5 477 aaKnown RBP19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 FOXQ1Q9C009 403 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 NXF1Q9UBU9 619 aaKnown RBP19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 FRMD4BQ9Y2L6 1034 aa19.09■□□□□ 0.65
TNFRSF1A-209ENST00000536717 HEPACAM2A8MVW5 462 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 F11P03951 625 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 CSH1P0DML2 217 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 CSH2P0DML3 217 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 GNL1P36915 607 aaPredicted RBP19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 PRCPP42785 496 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 RPL10AP62906 217 aaKnown RBP19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 PRKCQQ04759 706 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 COBLL1Q53SF7 1204 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 GPIHBP1Q8IV16 184 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 MFSD6LQ8IWD5 586 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 CCDC105Q8IYK2 499 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 OR6B3Q8NGW1 331 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 DEPDC1BQ8WUY9 529 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 SHDQ96IW2 340 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 BRD9Q9H8M2 597 aa19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 HELZP42694 1942 aaKnown RBP19.08■□□□□ 0.64
TNFRSF1A-209ENST00000536717 FANCMQ8IYD8 2048 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 SHISA7A6NL88 538 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 H0Y858 1186 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 IKBKBO14920 756 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 LETM1O95202 739 aaPredicted RBP19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 RFX1P22670 979 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 MAGEA11P43364 429 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 NLRP12P59046 1061 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 ZNF699Q32M78 642 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 ARHGAP15Q53QZ3 475 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 SASS6Q6UVJ0 657 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 C4orf50Q6ZRC1 276 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 SV2AQ7L0J3 742 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 PJA1Q8NG27 643 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 MYCBPAPQ8TBZ2 947 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 DNASE1L2Q92874 299 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 E2F7Q96AV8 911 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 PCED1BQ96HM7 432 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 PHOX2BQ99453 314 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 DPEP3Q9H4B8 488 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 TASP1Q9H6P5 420 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 SMYD3Q9H7B4 428 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 HEBP1Q9NRV9 189 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 DLGAP2Q9P1A6 1054 aa19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 MAGEC2Q9UBF1 373 aaPredicted RBP19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 MAGED2Q9UNF1 606 aaPredicted RBP19.07■□□□□ 0.64
TNFRSF1A-209ENST00000536717 KANSL1LA0AUZ9 987 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 NOL4O94818 638 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 DCNP07585 359 aaKnown RBP19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 BMP6P22004 513 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 GDI1P31150 447 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 HOXD11P31277 338 aaPredicted RBP19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 VAMP7P51809 220 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 ADAM9Q13443 819 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 MAPRE1Q15691 268 aaKnown RBP19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 ZNF667Q5HYK9 610 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 DTWD2Q8NBA8 298 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 IRF7Q92985 503 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 MYRFLQ96LU7 910 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 LRRC3BQ96PB8 259 aa19.06■□□□□ 0.64
TNFRSF1A-209ENST00000536717 GCNAQ96QF7 691 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms