RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GOLGA8SH3BPF8 625 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 TYROBPO43914 113 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 CD19P15391 556 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 CA4P22748 312 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 RPA3P35244 121 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 CTCFP49711 727 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 YARSP54577 528 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 PSMC1P62191 440 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 PDE4CQ08493 712 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 ACAP1Q15027 740 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 LY6KQ17RY6 165 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 SCARA5Q6ZMJ2 495 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 FAM47EQ6ZV65 393 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 KIAA0319LQ8IZA0 1049 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 NAT8LQ8N9F0 302 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 ZWILCHQ9H900 591 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 SAE1Q9UBE0 346 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 NXF1Q9UBU9 619 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 RABGEF1Q9UJ41 708 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 PNMA3Q9UL41 463 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 ZBTB42B2RXF5 422 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 ATP5HO75947 161 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 UNC5CO95185 931 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 IL1R2P27930 398 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 GPX6P59796 221 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 DNAJC3Q13217 504 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 SETDB1Q15047 1291 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 KCNT1Q5JUK3 1230 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 ATF7IP2Q5U623 682 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 CMASQ8NFW8 434 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 JOSD2Q8TAC2 188 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 FBF1Q8TES7 1133 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 RSAD2Q8WXG1 361 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 CPT1BQ92523 772 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 BCO2Q9BYV7 579 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 KIF9Q9HAQ2 790 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 ZMYND8Q9ULU4 1186 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 USH1CQ9Y6N9 552 aa16.83■□□□□ 0.28
CHMP1A-202ENST00000535997 LGR5O75473 907 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 SMTNL2Q2TAL5 461 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 ZNF667Q5HYK9 610 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 TREML2Q5T2D2 321 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 CAPN12Q6ZSI9 719 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 C3orf62Q6ZUJ4 267 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 RHPN2Q8IUC4 686 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 C4orf33Q8N1A6 199 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 LRRC71Q8N4P6 559 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 ATP11CQ8NB49 1132 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 LRRC8CQ8TDW0 803 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 GPR20Q99678 358 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 SPATC1LQ9H0A9 340 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 CYTH4Q9UIA0 394 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 MCM8Q9UJA3 840 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 E7ESA3 106 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 GOLGA8MH3BSY2 632 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 ZWINTO95229 277 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 IL18RAPO95256 599 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 MARK3P27448 753 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 ALDH3A1P30838 453 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 RAD23BP54727 409 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 DYNLT1P63172 113 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 MOGSQ13724 837 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 TFDP1Q14186 410 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 E2F5Q15329 346 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 ADGRD1Q6QNK2 874 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 NCAPG2Q86XI2 1143 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 ANKMY2Q8IV38 441 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 KCTD6Q8NC69 237 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 SYNCQ9H7C4 482 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 CLUHO75153 1309 aa16.82■□□□□ 0.28
CHMP1A-202ENST00000535997 A0A1W2PPM1 405 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 NOP56O00567 594 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 PEX10O60683 326 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 EDF1O60869 148 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 USP2O75604 605 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 KRT4P19013 534 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 RPL22P35268 128 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 GDF10P55107 478 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 HSDL1Q3SXM5 330 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 HHATQ5VTY9 493 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 XYLT1Q86Y38 959 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 LRRC37BQ96QE4 947 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 CPXM1Q96SM3 734 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 MPHOSPH6Q99547 160 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 ACSS3Q9H6R3 686 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 RPF1Q9H9Y2 349 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 TXLNGQ9NUQ3 528 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 POLIQ9UNA4 740 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 SSC5DA1L4H1 1573 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 INO80B-WBP1J3KQ70 363 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 APOC4-APOC2K7ER74 178 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 RNF8O76064 485 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 APOC2P02655 101 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 KRT19P08727 400 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 KRT16P08779 473 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 TSHRP16473 764 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 SSTR1P30872 391 aa16.81■□□□□ 0.28
CHMP1A-202ENST00000535997 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms