RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 TXNDC11Q6PKC3 985 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 TRAPPC11Q7Z392 1133 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 RALGPS2Q86X27 583 aaPredicted RBP18.68■□□□□ 0.58
VPS51-213ENST00000533827 NELFCDQ8IXH7 590 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 MAB21L3Q8N8X9 362 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 TTC8Q8TAM2 541 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 RUBCNQ92622 972 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 TRMT2BQ96GJ1 504 aaKnown RBP18.68■□□□□ 0.58
VPS51-213ENST00000533827 FUBP3Q96I24 572 aaKnown RBP eCLIP18.68■□□□□ 0.58
VPS51-213ENST00000533827 MYRFLQ96LU7 910 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 RCOR1Q9UKL0 485 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 CFAP45Q9UL16 551 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 MAGED2Q9UNF1 606 aaPredicted RBP18.68■□□□□ 0.58
VPS51-213ENST00000533827 F5P12259 2224 aa18.68■□□□□ 0.58
VPS51-213ENST00000533827 ATP2C2O75185 946 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 TADA3O75528 432 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 CST3P01034 146 aaPredicted RBP18.67■□□□□ 0.58
VPS51-213ENST00000533827 LMO2P25791 158 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 AVPR1AP37288 418 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 CCR3P51677 355 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 DNM1Q05193 864 aaKnown RBP18.67■□□□□ 0.58
VPS51-213ENST00000533827 TNK2Q07912 1038 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 CYP24A1Q07973 514 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 PSMD6Q15008 389 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 TXNDC8Q6A555 127 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 MON1AQ86VX9 555 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 SPATA2LQ8IUW3 424 aaPredicted RBP18.67■□□□□ 0.58
VPS51-213ENST00000533827 C12orf56Q8IXR9 622 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 XXYLT1Q8NBI6 393 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 MRPS31Q92665 395 aaKnown RBP18.67■□□□□ 0.58
VPS51-213ENST00000533827 USP13Q92995 863 aaPredicted RBP18.67■□□□□ 0.58
VPS51-213ENST00000533827 CGRRF1Q99675 332 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 SLC39A2Q9NP94 309 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 THG1LQ9NWX6 298 aaKnown RBP18.67■□□□□ 0.58
VPS51-213ENST00000533827 UXTQ9UBK9 157 aaPredicted RBP18.67■□□□□ 0.58
VPS51-213ENST00000533827 CCL26Q9Y258 94 aa18.67■□□□□ 0.58
VPS51-213ENST00000533827 GVINP1Q7Z2Y8 2422 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 DLATP10515 647 aaKnown RBP18.66■□□□□ 0.58
VPS51-213ENST00000533827 TNNI1P19237 187 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 WARSP23381 471 aaKnown RBP18.66■□□□□ 0.58
VPS51-213ENST00000533827 MAGEA11P43364 429 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 AFMP43652 599 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 CYP2J2P51589 502 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 LRRC32Q14392 662 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 HS2ST1Q7LGA3 356 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 DCLK2Q8N568 766 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 SPRYD3Q8NCJ5 442 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 FAM83CQ9BQN1 747 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 SYT15Q9BQS2 421 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 GZF1Q9H116 711 aaPredicted RBP18.66■□□□□ 0.58
VPS51-213ENST00000533827 EPC1Q9H2F5 836 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 KIF9Q9HAQ2 790 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 CRTAC1Q9NQ79 661 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 GKN1Q9NS71 199 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 RBM12Q9NTZ6 932 aaKnown RBP18.66■□□□□ 0.58
VPS51-213ENST00000533827 TDP1Q9NUW8 608 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 CDH9Q9ULB4 789 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 DMXL1Q9Y485 3027 aa18.66■□□□□ 0.58
VPS51-213ENST00000533827 PSMC1P62191 440 aaKnown RBP18.65■□□□□ 0.58
VPS51-213ENST00000533827 ZNF268Q14587 947 aaPredicted RBP18.65■□□□□ 0.58
VPS51-213ENST00000533827 PPP2R5DQ14738 602 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 ITPRIPL2Q3MIP1 535 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 DGKKQ5KSL6 1271 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 C4orf50Q6ZRC1 276 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 SCN4BQ8IWT1 228 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 GRAMD1CQ8IYS0 662 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 KIAA2013Q8IYS2 634 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 SPEM1Q8N4L4 309 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 RIN3Q8TB24 985 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 CCDC127Q96BQ5 260 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 HINFPQ9BQA5 517 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 CGNQ9P2M7 1197 aaKnown RBP18.65■□□□□ 0.58
VPS51-213ENST00000533827 MAGEC2Q9UBF1 373 aaPredicted RBP18.65■□□□□ 0.58
VPS51-213ENST00000533827 SERTAD1Q9UHV2 236 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 NME7Q9Y5B8 376 aa18.65■□□□□ 0.58
VPS51-213ENST00000533827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.64■□□□□ 0.57
VPS51-213ENST00000533827 ACTN4O43707 911 aaKnown RBP18.64■□□□□ 0.57
VPS51-213ENST00000533827 KLRC4O43908 158 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 FAM163BP0C2L3 166 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 SLFN14P0C7P3 912 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 ID4P47928 161 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 CXCL12P48061 93 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 NRLP54845 237 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 SATB1Q01826 763 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 CCINQ13939 588 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 PON2Q15165 354 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 KNOP1Q1ED39 458 aaKnown RBP18.64■□□□□ 0.57
VPS51-213ENST00000533827 CEP57L1Q8IYX8 460 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 MYLPFQ96A32 169 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 MMS19Q96T76 1030 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 MRPL45Q9BRJ2 306 aaKnown RBP18.64■□□□□ 0.57
VPS51-213ENST00000533827 HPS4Q9NQG7 708 aa18.64■□□□□ 0.57
VPS51-213ENST00000533827 GREB1Q4ZG55 1949 aa18.63■□□□□ 0.57
VPS51-213ENST00000533827 TACC1O75410 805 aa18.63■□□□□ 0.57
VPS51-213ENST00000533827 PAPSS2O95340 614 aaPredicted RBP18.63■□□□□ 0.57
VPS51-213ENST00000533827 PDGFRBP09619 1106 aa18.63■□□□□ 0.57
VPS51-213ENST00000533827 RUNX3Q13761 415 aa18.63■□□□□ 0.57
VPS51-213ENST00000533827 MAPRE1Q15691 268 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms