RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 TACC1O75410 805 aa23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 STAU1O95793 577 aaKnown RBP23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 HOXD11P31277 338 aaPredicted RBP23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 CLDN10P78369 228 aa23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 NCOA4Q13772 614 aa23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 MAPRE1Q15691 268 aaKnown RBP23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 CFAP221Q4G0U5 840 aa23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 DNASE1L2Q92874 299 aa23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 ELMO3Q96BJ8 720 aa23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 FUBP3Q96I24 572 aaKnown RBP eCLIP23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 COL4A3Q01955 1670 aa23.44■■□□□ 1.34
NDUFS3-210ENST00000533105 SLC38A8A6NNN8 435 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 LRRN2O75325 713 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 BDNFP23560 247 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 NLRP12P59046 1061 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 FAM160A1Q05DH4 1040 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 MDH1BQ5I0G3 518 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 ENGASEQ8NFI3 743 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 TMC2Q8TDI7 906 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 DDX23Q9BUQ8 820 aaKnown RBP23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 SMG9Q9H0W8 520 aaKnown RBP23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 MTF2Q9Y483 593 aaPredicted RBP23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 NME7Q9Y5B8 376 aa23.43■■□□□ 1.34
NDUFS3-210ENST00000533105 FAM170BA6NMN3 283 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 A8MXQ7 604 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 AKAP3O75969 853 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 VNN1O95497 513 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 F11P03951 625 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 FAM163BP0C2L3 166 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 RPL13P26373 211 aaKnown RBP23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 MRE11P49959 708 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 VAMP7P51809 220 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 ADAM9Q13443 819 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 ZNF667Q5HYK9 610 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 SCARA5Q6ZMJ2 495 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 TMEM150AQ86TG1 271 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 ERCC4Q92889 916 aaPredicted RBP23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 PCED1BQ96HM7 432 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 SLC46A2Q9BY10 475 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 SMYD3Q9H7B4 428 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 RMND1Q9NWS8 449 aa23.42■■□□□ 1.34
NDUFS3-210ENST00000533105 PRAMEF12O95522 483 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 PTPN1P18031 435 aaKnown RBP23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 GRIK1P39086 918 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 RAP1GAPP47736 663 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 CDH8P55286 799 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 ANGPT1Q15389 498 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 NFIL3Q16649 462 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 ZACNQ401N2 412 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 ZNF852Q6ZMS4 543 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 SV2AQ7L0J3 742 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 FAM186BQ8IYM0 893 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 MAB21L3Q8N8X9 362 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 MYCBPAPQ8TBZ2 947 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 MRPS31Q92665 395 aaKnown RBP23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 DPEP3Q9H4B8 488 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 VRTNQ9H8Y1 702 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 LTB4R2Q9NPC1 389 aa23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 UXTQ9UBK9 157 aaPredicted RBP23.41■■□□□ 1.34
NDUFS3-210ENST00000533105 IKBKBO14920 756 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 MAPK13O15264 365 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 NOL4O94818 638 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 SMC2O95347 1197 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 KRT13P13646 458 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 GLULP15104 373 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 MAGEA11P43364 429 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 SGSM1Q2NKQ1 1148 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 C1orf220Q5T0J3 134 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 TXNDC8Q6A555 127 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 VSTM1Q6UX27 236 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 LRRC3BQ96PB8 259 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 DLGAP2Q9P1A6 1054 aa23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 HOOK1Q9UJC3 728 aaKnown RBP23.4■■□□□ 1.34
NDUFS3-210ENST00000533105 CHADO15335 359 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 TRIM49P0CI25 452 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 TRIM49CP0CI26 452 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 ANXA13P27216 316 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 PSMC2P35998 433 aaKnown RBP23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 AVPR1AP37288 418 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 PIK3CAP42336 1068 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 FCHO2Q0JRZ9 810 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 INTS8Q75QN2 995 aaKnown RBP23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 CMTM8Q8IZV2 173 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 CSGALNACT1Q8TDX6 532 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 SMARCE1Q969G3 411 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 TRMT2BQ96GJ1 504 aaKnown RBP23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 ZFYVE19Q96K21 471 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 GSDMAQ96QA5 445 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 BCO2Q9BYV7 579 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 MMRN2Q9H8L6 949 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 TRPC7Q9HCX4 862 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 TRPV5Q9NQA5 729 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 ZMYM5Q9UJ78 669 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 MRPS17Q9Y2R5 130 aaKnown RBP23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 PIAS3Q9Y6X2 628 aa23.39■■□□□ 1.33
NDUFS3-210ENST00000533105 P4HA1P13674 534 aa23.38■■□□□ 1.33
NDUFS3-210ENST00000533105 DDX6P26196 483 aaKnown RBP eCLIP23.38■■□□□ 1.334e-6■■□□□ 13.7
NDUFS3-210ENST00000533105 TARSP26639 723 aaKnown RBP23.38■■□□□ 1.33
NDUFS3-210ENST00000533105 WEE1P30291 646 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms