RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 CWF19L1Q69YN2 538 aaKnown RBP15.26■□□□□ 0.03
CAPN1-216ENST00000528739 SV2AQ7L0J3 742 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 ARID3BQ8IVW6 561 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-216ENST00000528739 PRSS33Q8NF86 280 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 MRPS31Q92665 395 aaKnown RBP15.26■□□□□ 0.03
CAPN1-216ENST00000528739 E2F7Q96AV8 911 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 GZF1Q9H116 711 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-216ENST00000528739 SMYD3Q9H7B4 428 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 UXTQ9UBK9 157 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-216ENST00000528739 SIT1Q9Y3P8 196 aa15.26■□□□□ 0.03
CAPN1-216ENST00000528739 SLC38A8A6NNN8 435 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 H0Y858 1186 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 IKBKBO14920 756 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 STAU1O95793 577 aaKnown RBP15.25■□□□□ 0.03
CAPN1-216ENST00000528739 DCNP07585 359 aaKnown RBP15.25■□□□□ 0.03
CAPN1-216ENST00000528739 PTPN1P18031 435 aaKnown RBP15.25■□□□□ 0.03
CAPN1-216ENST00000528739 TRIM21P19474 475 aaKnown RBP15.25■□□□□ 0.03
CAPN1-216ENST00000528739 AOC1P19801 751 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 FCARP24071 287 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 NFIL3Q16649 462 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 TCERG1LQ5VWI1 586 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 FAM171BQ6P995 826 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 VITQ6UXI7 678 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 TPRG1Q6ZUI0 275 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 MAB21L3Q8N8X9 362 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 MYCBPAPQ8TBZ2 947 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 CSGALNACT1Q8TDX6 532 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 DEPDC1BQ8WUY9 529 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 ATOH1Q92858 354 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-216ENST00000528739 IRF7Q92985 503 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 PCED1BQ96HM7 432 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 FUBP3Q96I24 572 aaKnown RBP eCLIP15.25■□□□□ 0.03
CAPN1-216ENST00000528739 GTPBP4Q9BZE4 634 aaKnown RBP15.25■□□□□ 0.03
CAPN1-216ENST00000528739 XYLT2Q9H1B5 865 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 DPEP3Q9H4B8 488 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 TASP1Q9H6P5 420 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 TRPC7Q9HCX4 862 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 CRTAC1Q9NQ79 661 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 HEBP1Q9NRV9 189 aa15.25■□□□□ 0.03
CAPN1-216ENST00000528739 BIN1O00499 593 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 MAPK13O15264 365 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 GALR2O43603 387 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-216ENST00000528739 VNN1O95497 513 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 HLA-DRAP01903 254 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 FAM163BP0C2L3 166 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 CD72P21854 359 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 AVPR1AP37288 418 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 NLRP12P59046 1061 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 CLDN10P78369 228 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 PRKCQQ04759 706 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 IFRD2Q12894 506 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-216ENST00000528739 EDRF1Q3B7T1 1238 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 ZACNQ401N2 412 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 CFAP221Q4G0U5 840 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 DCAF17Q5H9S7 520 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-216ENST00000528739 SPOPLQ6IQ16 392 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 KLHL10Q6JEL2 608 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 VSTM1Q6UX27 236 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 LIMS2Q7Z4I7 341 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 MFSD6LQ8IWD5 586 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 TMEM174Q8WUU8 243 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 PKMYT1Q99640 499 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 FOXQ1Q9C009 403 aa15.24■□□□□ 0.03
CAPN1-216ENST00000528739 SMG9Q9H0W8 520 aaKnown RBP15.24■□□□□ 0.03
CAPN1-216ENST00000528739 ATP8B3O60423 1300 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 KANSL1LA0AUZ9 987 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 FAM170BA6NMN3 283 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 CLDN5O00501 218 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 PSMA7O14818 248 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 TRIM66O15016 1216 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 STX10O60499 249 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 ABL1P00519 1130 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 F11P03951 625 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 HMGA1P17096 107 aaKnown RBP15.23■□□□□ 0.03
CAPN1-216ENST00000528739 MAGEA11P43364 429 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 KPNA1P52294 538 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-216ENST00000528739 NHLH1Q02575 133 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 TXNDC8Q6A555 127 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 ANKRD40Q6AI12 368 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 PHLDB3Q6NSJ2 640 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 B3GALNT2Q8NCR0 500 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 TTC8Q8TAM2 541 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 TAF4BQ92750 862 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 TNIP3Q96KP6 325 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 SLC46A2Q9BY10 475 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 IRF2BPLQ9H1B7 796 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 VRTNQ9H8Y1 702 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 TRPV4Q9HBA0 871 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 IL21Q9HBE4 155 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 THG1LQ9NWX6 298 aaKnown RBP15.23■□□□□ 0.03
CAPN1-216ENST00000528739 MAN1B1Q9UKM7 699 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 DOCK8Q8NF50 2099 aa15.23■□□□□ 0.03
CAPN1-216ENST00000528739 TSC2P49815 1807 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 F8VP50 259 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 DDX6P26196 483 aaKnown RBP eCLIP15.22■□□□□ 0.03
CAPN1-216ENST00000528739 NUBP1P53384 320 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 STARD6P59095 220 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 FKBP3Q00688 224 aaKnown RBP15.22■□□□□ 0.03
CAPN1-216ENST00000528739 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms