RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 ZKSCAN5Q9Y2L8 839 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 NR2E1Q9Y466 385 aa13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 SF3B1O75533 1304 aaKnown RBP eCLIP13.53□□□□□ -0.24
SSSCA1-203ENST00000526877 PIRO00625 290 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 TGM5O43548 720 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 GLUD1P00367 558 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 KRT5P13647 590 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 FGFR3P22607 806 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 PRKCIP41743 596 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 TAF6P49848 677 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 CLCNKBP51801 687 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 BPIFB4P59827 614 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 UPP1Q16831 310 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 SV2CQ496J9 727 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 FAM171A1Q5VUB5 890 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 SCARA3Q6AZY7 606 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 IRF2BP2Q7Z5L9 587 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 FAM71AQ8IYT1 594 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 CCDC170Q8IYT3 715 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 ZDHHC14Q8IZN3 488 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 TTC39CQ8N584 583 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 C3orf58Q8NDZ4 430 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 PIK3R5Q8WYR1 880 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 ZNF707Q96C28 371 aaPredicted RBP13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 CCDC42Q96M95 316 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 UROC1Q96N76 676 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 CHP1Q99653 195 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 TTPALQ9BTX7 342 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 GPR88Q9GZN0 384 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 CYP3A43Q9HB55 503 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 GOLGA2P5Q9HBQ8 144 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 PCDHB4Q9Y5E5 795 aa13.52□□□□□ -0.25
SSSCA1-203ENST00000526877 DOCK8Q8NF50 2099 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 SSU72P8A0A1W2PR75 194 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 SOWAHDA6NJG2 315 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 RFPL2O75678 378 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 PNMA6AP0CW24 399 aaPredicted RBP13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 PAX3P23760 479 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 MSNP26038 577 aaKnown RBP13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 MAPK8IP2Q13387 824 aaPredicted RBP13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 E4F1Q66K89 784 aaPredicted RBP13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 HGSNATQ68CP4 663 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 SCARA5Q6ZMJ2 495 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 ZSCAN30Q86W11 494 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 ASIC4Q96FT7 647 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 MMS19Q96T76 1030 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 BCO2Q9BYV7 579 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 FAM124BQ9H5Z6 455 aaPredicted RBP13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 HAUS4Q9H6D7 363 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 NHEJ1Q9H9Q4 299 aaPredicted RBP13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 ARHGAP20Q9P2F6 1191 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 DPP7Q9UHL4 492 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 POLIQ9UNA4 740 aa13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 EPN1Q9Y6I3 576 aaPredicted RBP13.51□□□□□ -0.25
SSSCA1-203ENST00000526877 TMEM221A6NGB7 291 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 M0R296 226 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 PODXLO00592 558 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 CYP26A1O43174 497 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 ADAM12O43184 909 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 AKR1B10O60218 316 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 B3GAT3O94766 335 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 ANXA13P27216 316 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 ASPAP45381 313 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 CREMQ03060 361 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 PTK2Q05397 1052 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 CEP57Q86XR8 500 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 ARID3AQ99856 593 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 CISHQ9NSE2 258 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 LIMD1Q9UGP4 676 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 SNX9Q9Y5X1 595 aa13.5□□□□□ -0.25
SSSCA1-203ENST00000526877 PPEF2O14830 753 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 CCP110O43303 1012 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 HUS1O60921 280 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 ZMYND10O75800 440 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 NDUFA10O95299 355 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 CD58P19256 250 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 BRCC3P46736 316 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 PDE6CP51160 858 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 LILRA4P59901 499 aa13.49□□□□□ -0.25
SSSCA1-203ENST00000526877 SPA17Q15506 151 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms