RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 PARP6Q2NL67 630 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 PTPN20Q4JDL3 420 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 HHATQ5VTY9 493 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 DENND1BQ6P3S1 775 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 OTOAQ7RTW8 1153 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 PPIL6Q8IXY8 311 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 NAT8LQ8N9F0 302 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 JOSD2Q8TAC2 188 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 MZB1Q8WU39 189 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF570Q96NI8 536 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 DHRS4Q9BTZ2 278 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 PHACTR1Q9C0D0 580 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ZWILCHQ9H900 591 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 FETUBQ9UGM5 382 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 CYTH4Q9UIA0 394 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 HAO1Q9UJM8 370 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 SNCAIPQ9Y6H5 919 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 DCTN3O75935 186 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ATP5HO75947 161 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 T-ENOLP0DO92 83 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 UBA1P22314 1058 aaKnown RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 PSMA2P25787 234 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 RFC1P35251 1148 aaPredicted RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 STXBP2Q15833 593 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 TAZQ16635 292 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 PCGF5Q86SE9 256 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ATP11CQ8NB49 1132 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF75CPQ92670 426 aaPredicted RBP12.25□□□□□ -0.45
LINC01001-201ENST00000526704 WRNIP1Q96S55 665 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 PAFAH2Q99487 392 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 AGTPBP1Q9UPW5 1226 aa12.25□□□□□ -0.45
LINC01001-201ENST00000526704 KAT6AQ92794 2004 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 EVPLQ92817 2033 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 TCRBV7S3A2A0A539 114 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 E7ESA3 106 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ABLIM1O14639 778 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 CST8O60676 142 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 PIAS1O75925 651 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 TMEM63AO94886 807 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ZWINTO95229 277 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 CNTN2Q02246 1040 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 MAPK6Q16659 721 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 CATSPERGQ6ZRH7 1159 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 BBS12Q6ZW61 710 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 RHPN2Q8IUC4 686 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 KIAA0319LQ8IZA0 1049 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 MAB21L3Q8N8X9 362 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 INPP5DQ92835 1189 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ACSS3Q9H6R3 686 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 PICK1Q9NRD5 415 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 EFR3BQ9Y2G0 817 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ZSWIM8A7E2V4 1837 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 TOM1L1O75674 476 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 FARP2O94887 1054 aaPredicted RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 CD48P09326 243 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 HOXC6P09630 235 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ADRA1DP25100 572 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 PHBP35232 272 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 RPL22P35268 128 aaKnown RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ARL4CP56559 192 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 SGSM1Q2NKQ1 1148 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF699Q32M78 642 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 DCAF15Q66K64 600 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 DHX37Q8IY37 1157 aaKnown RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 AGGF1Q8N302 714 aaeCLIP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ZNF276Q8N554 614 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 FBXO36Q8NEA4 188 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 PYROXD1Q8WU10 500 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 PRPF31Q8WWY3 499 aaKnown RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 MIEF2Q96C03 454 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 SLC7A6OSQ96CW6 309 aaPredicted RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 ACO2Q99798 780 aaKnown RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 MRPL4Q9BYD3 311 aaKnown RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 XYLT2Q9H1B5 865 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 CPSF3Q9UKF6 684 aaKnown RBP12.24□□□□□ -0.45
LINC01001-201ENST00000526704 STRIP2Q9ULQ0 834 aa12.24□□□□□ -0.45
LINC01001-201ENST00000526704 SIGLEC16A6NMB1 481 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 OGTO15294 1046 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 MAFO75444 373 aaPredicted RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 ATP2A2P16615 1042 aaKnown RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 KDELR1P24390 212 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 ALDH3A1P30838 453 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 SLC8A3P57103 927 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 DUOXA2Q1HG44 320 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 CDCA2Q69YH5 1023 aaPredicted RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 KIRREL3Q8IZU9 778 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 TAB3Q8N5C8 712 aaPredicted RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 DCAKDQ8WVC6 231 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 FRMD8P1Q9BZ68 369 aaPredicted RBP12.23□□□□□ -0.45
LINC01001-201ENST00000526704 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 POLIQ9UNA4 740 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 NUMBLQ9Y6R0 609 aa12.23□□□□□ -0.45
LINC01001-201ENST00000526704 CCDC189A1A4V9 331 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms