RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 RECQL4O94761 1208 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 LAG3P18627 525 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 SLC39A12Q504Y0 691 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 KCNN4O15554 427 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 ASS1P00966 412 aaKnown RBP17.82■□□□□ 0.44
BEST1-203ENST00000524877 CUL1Q13616 776 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 LLGL2Q6P1M3 1020 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 LRRC8DQ7L1W4 858 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 SH3BP5LQ7L8J4 393 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 C12orf42Q96LP6 360 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 KBTBD4Q9NVX7 518 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 STK39Q9UEW8 545 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 PYCARDQ9ULZ3 195 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 ITIH6Q6UXX5 1313 aa17.82■□□□□ 0.44
BEST1-203ENST00000524877 KDM1AO60341 852 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 P3H1Q32P28 736 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 USP41Q3LFD5 358 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 CREBZFQ9NS37 354 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 PLA2G4CQ9UP65 541 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 EML1O00423 815 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 KRT14P02533 472 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 ETFBP38117 255 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 IL9RQ01113 521 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 BCAP29Q9UHQ4 241 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 BARX2Q9UMQ3 279 aaPredicted RBP17.81■□□□□ 0.44
BEST1-203ENST00000524877 TMEM150BA6NC51 233 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 OXCT1P55809 520 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 PHEXP78562 749 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 ZNF211Q13398 564 aaPredicted RBP17.81■□□□□ 0.44
BEST1-203ENST00000524877 PPP1R13LQ8WUF5 828 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 FOPNLQ96NB1 174 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 A0A1B0GTH6 734 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 YWHAQP27348 245 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
BEST1-203ENST00000524877 SLC18A3Q16572 532 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 CAPRIN2Q6IMN6 1127 aaKnown RBP17.81■□□□□ 0.44
BEST1-203ENST00000524877 ANKS3Q6ZW76 656 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 PALB2Q86YC2 1186 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 KRT35Q92764 455 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 CENPKQ9BS16 269 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 UTP6Q9NYH9 597 aaKnown RBP17.81■□□□□ 0.44
BEST1-203ENST00000524877 GIT1Q9Y2X7 761 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 A0A1W2PQJ5 194 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 KRT37O76014 449 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 CHRNA3P32297 505 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 PABPC1LQ4VXU2 614 aaKnown RBP17.81■□□□□ 0.44
BEST1-203ENST00000524877 FEZF2Q8TBJ5 459 aa17.81■□□□□ 0.44
BEST1-203ENST00000524877 ANO9A1A5B4 782 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 KPNA7A9QM74 516 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 FGRP09769 529 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 CCL5P13501 91 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 ACBD5Q5T8D3 534 aaPredicted RBP17.8■□□□□ 0.44
BEST1-203ENST00000524877 KDELC2Q7Z4H8 507 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 SLC35G2Q8TBE7 412 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 FMO2Q99518 471 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 ZNF518BQ9C0D4 1074 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 TMEM117Q9H0C3 514 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 STN1Q9H668 368 aaKnown RBP17.8■□□□□ 0.44
BEST1-203ENST00000524877 KCNMB3Q9NPA1 279 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 KLHL11Q9NVR0 708 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 DOT1LQ8TEK3 1739 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 C10orf71Q711Q0 1435 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 MTSS1O43312 755 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 GJB1P08034 283 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 GPS1Q13098 491 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 SNX19Q92543 992 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 INTS13Q9NVM9 706 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 GRID2IPA4D2P6 1211 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 PPP1R3GB7ZBB8 358 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 TPD52L2O43399 206 aaKnown RBP17.8■□□□□ 0.44
BEST1-203ENST00000524877 ESRRBO95718 433 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 MFSD4BQ5TF39 518 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 ARMC6Q6NXE6 501 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 TRIM67Q6ZTA4 783 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 BRSK2Q8IWQ3 736 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 GIPC2Q8TF65 315 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 TNFSF13BQ9Y275 285 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 TSPAN18Q96SJ8 248 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 EGFL8Q99944 293 aa17.8■□□□□ 0.44
BEST1-203ENST00000524877 DMAP1Q9NPF5 467 aaPredicted RBP17.8■□□□□ 0.44
BEST1-203ENST00000524877 AFF4Q9UHB7 1163 aaKnown RBP17.8■□□□□ 0.44
BEST1-203ENST00000524877 NVLO15381 856 aaKnown RBP17.79■□□□□ 0.44
BEST1-203ENST00000524877 CASP4P49662 377 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 TKTL1P51854 596 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 SLC30A1Q9Y6M5 507 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 SLC12A1Q13621 1099 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 THEMIS2Q5TEJ8 643 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 PGLYRP2Q96PD5 576 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 POP1Q99575 1024 aaKnown RBP17.79■□□□□ 0.44
BEST1-203ENST00000524877 SSU72P8A0A1W2PR75 194 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 GOLGA8MH3BSY2 632 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 MAPK13O15264 365 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 MMEL1Q495T6 779 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 TNS4Q8IZW8 715 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 CDC26Q8NHZ8 85 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 IL31RAQ8NI17 732 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 GPR20Q99678 358 aa17.79■□□□□ 0.44
BEST1-203ENST00000524877 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
BEST1-203ENST00000524877 ZCCHC17Q9NP64 241 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms