RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	TACC1	O75410	805 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	PDGFRB	P09619	1106 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	PRR29	P0C7W0	189 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	P4HA1	P13674	534 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	WEE1	P30291	646 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	GNL1	P36915	607 aa	Predicted RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	MAGEA11	P43364	429 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	GPR15	P49685	360 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	KPNA1	P52294	538 aa	Predicted RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	NLRP12	P59046	1061 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	MYL6	P60660	151 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	PSMC1	P62191	440 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	PLCB2	Q00722	1185 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	FCHO2	Q0JRZ9	810 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	DPYD	Q12882	1025 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	ZNF699	Q32M78	642 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	CEP135	Q66GS9	1140 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	FAM171B	Q6P995	826 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	ZC3H14	Q6PJT7	736 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	VSTM1	Q6UX27	236 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	LIMS2	Q7Z4I7	341 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	CMTM8	Q8IZV2	173 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	CELF5	Q8N6W0	485 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	BPIFB1	Q8TDL5	484 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	PARD3B	Q8TEW8	1205 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	TMEM174	Q8WUU8	243 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	FAM3C	Q92520	227 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	TRMT2B	Q96GJ1	504 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	PKMYT1	Q99640	499 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	MKNK1	Q9BUB5	465 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	EHD2	Q9NZN4	543 aa		13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	NDRG2	Q9UN36	371 aa	Known RBP	13.46	□□□□□ -0.25
RBBP4-215	ENST00000524393	TICRR	Q7Z2Z1	1910 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	SLC38A8	A6NNN8	435 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393		A8MXQ7	604 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	TRIM66	O15016	1216 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	HCRT	O43612	131 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	ATP2C2	O75185	946 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	LRRN2	O75325	713 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	NOL4	O94818	638 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	F11	P03951	625 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	HMGA1	P17096	107 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	TRIM21	P19474	475 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	LMO2	P25791	158 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	RPL13	P26373	211 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	TARS	P26639	723 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	GRIK1	P39086	918 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	RPS9	P46781	194 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	CASP4	P49662	377 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	MLLT6	P55198	1093 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	KCNB1	Q14721	858 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	ZNF667	Q5HYK9	610 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	SDHAF4	Q5VUM1	108 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	FRMD5	Q7Z6J6	570 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	GPIHBP1	Q8IV16	184 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	MAB21L3	Q8N8X9	362 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	MYCBPAP	Q8TBZ2	947 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	TMC2	Q8TDI7	906 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	ZNF516	Q92618	1163 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	NKD2	Q969F2	451 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	MYLPF	Q96A32	169 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	CEP295NL	Q96MC4	621 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	MRPL45	Q9BRJ2	306 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	GOLPH3L	Q9H4A5	285 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	KIF9	Q9HAQ2	790 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	DMAC2	Q9NW81	257 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	RMND1	Q9NWS8	449 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	HOOK1	Q9UJC3	728 aa	Known RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	TRAF3IP3	Q9Y228	551 aa		13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	MTF2	Q9Y483	593 aa	Predicted RBP	13.45	□□□□□ -0.26
RBBP4-215	ENST00000524393	ATP8B3	O60423	1300 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	COL4A3	Q01955	1670 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	MAPK13	O15264	365 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	PRAMEF12	O95522	483 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	KRT13	P13646	458 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	BDNF	P23560	247 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	NR2F2	P24468	414 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	CLDN10	P78369	228 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	NCOA4	Q13772	614 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	MDH1B	Q5I0G3	518 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	TDRD10	Q5VZ19	366 aa	Known RBP	13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	GUF1	Q8N442	669 aa	Known RBP	13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	STKLD1	Q8NE28	680 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	RSPRY1	Q96DX4	576 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	PCED1B	Q96HM7	432 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	MYRFL	Q96LU7	910 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	IER2	Q9BTL4	223 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	SLC46A2	Q9BY10	475 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	IMPG2	Q9BZV3	1241 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	VRTN	Q9H8Y1	702 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	CRTAC1	Q9NQ79	661 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	TDP1	Q9NUW8	608 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	MAPK8IP1	Q9UQF2	711 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	COL4A2	P08572	1712 aa		13.44	□□□□□ -0.26
RBBP4-215	ENST00000524393	NCAN	O14594	1321 aa		13.43	□□□□□ -0.26
RBBP4-215	ENST00000524393	IKBKB	O14920	756 aa		13.43	□□□□□ -0.26
RBBP4-215	ENST00000524393	C4BPA	P04003	597 aa	Known RBP	13.43	□□□□□ -0.26

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