RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 NCOA4Q13772 614 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 ZACNQ401N2 412 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 C1orf228Q6PIY5 440 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 TPRG1Q6ZUI0 275 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 MYCBPAPQ8TBZ2 947 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 GIPC2Q8TF65 315 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 SPATA17Q96L03 361 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 LPIN3Q9BQK8 851 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 SYT15Q9BQS2 421 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 IL21Q9HBE4 155 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 ZNF334Q9HCZ1 680 aaPredicted RBP18.44■□□□□ 0.54
CCNC-213ENST00000523541 MRPS17Q9Y2R5 130 aaKnown RBP18.44■□□□□ 0.54
CCNC-213ENST00000523541 PIEZO1Q92508 2521 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 MYBPHLA2RUH7 354 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 MAN2B1O00754 1011 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 DPYSL4O14531 572 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 NOL4O94818 638 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 HMGA1P17096 107 aaKnown RBP18.43■□□□□ 0.54
CCNC-213ENST00000523541 CD72P21854 359 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 NR2F2P24468 414 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 ACAT1P24752 427 aaKnown RBP18.43■□□□□ 0.54
CCNC-213ENST00000523541 CYP2F1P24903 491 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 LMO2P25791 158 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 GDI1P31150 447 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 VIPR2P41587 438 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 MYL6P60660 151 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 FCHO2Q0JRZ9 810 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 TDRD10Q5VZ19 366 aaKnown RBP18.43■□□□□ 0.54
CCNC-213ENST00000523541 CEP135Q66GS9 1140 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 ARID3BQ8IVW6 561 aaPredicted RBP18.43■□□□□ 0.54
CCNC-213ENST00000523541 PJA1Q8NG27 643 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 PLEKHO2Q8TD55 490 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 MSANTD3Q96H12 275 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 MKNK1Q9BUB5 465 aa18.43■□□□□ 0.54
CCNC-213ENST00000523541 HEPACAM2A8MVW5 462 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 ZNF263O14978 683 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 CHADO15335 359 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 NCAM2O15394 837 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 GFRA3O60609 400 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 F11P03951 625 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 KRT13P13646 458 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 GTF2H1P32780 548 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 PPP1R2P41236 205 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 CASP4P49662 377 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 VAMP7P51809 220 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 NLRP12P59046 1061 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 ZNF699Q32M78 642 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 ZNF667Q5HYK9 610 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 GPR158Q5T848 1215 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 ZNF658Q5TYW1 1059 aaPredicted RBP18.42■□□□□ 0.54
CCNC-213ENST00000523541 VITQ6UXI7 678 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 ZNF852Q6ZMS4 543 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 GPIHBP1Q8IV16 184 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 OR6B3Q8NGW1 331 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 FAXDC2Q96IV6 333 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 BCO2Q9BYV7 579 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 HEBP1Q9NRV9 189 aa18.42■□□□□ 0.54
CCNC-213ENST00000523541 CACNA1HO95180 2353 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 FAM170BA6NMN3 283 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 NRG2O14511 850 aaPredicted RBP18.41■□□□□ 0.54
CCNC-213ENST00000523541 PDGFRBP09619 1106 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 PTPN1P18031 435 aaKnown RBP18.41■□□□□ 0.54
CCNC-213ENST00000523541 PLCB2Q00722 1185 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 PNOCQ13519 176 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 DDR2Q16832 855 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 ZCWPW2Q504Y3 356 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 SV2AQ7L0J3 742 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 FRMD5Q7Z6J6 570 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 CELF5Q8N6W0 485 aaKnown RBP18.41■□□□□ 0.54
CCNC-213ENST00000523541 CSGALNACT1Q8TDX6 532 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 MRPS31Q92665 395 aaKnown RBP18.41■□□□□ 0.54
CCNC-213ENST00000523541 SMARCE1Q969G3 411 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 TNIP3Q96KP6 325 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 MRPL45Q9BRJ2 306 aaKnown RBP18.41■□□□□ 0.54
CCNC-213ENST00000523541 CRTAC1Q9NQ79 661 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 NXF1Q9UBU9 619 aaKnown RBP18.41■□□□□ 0.54
CCNC-213ENST00000523541 MAGED2Q9UNF1 606 aaPredicted RBP18.41■□□□□ 0.54
CCNC-213ENST00000523541 MAPK8IP1Q9UQF2 711 aa18.41■□□□□ 0.54
CCNC-213ENST00000523541 SLC38A8A6NNN8 435 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 A8MXQ7 604 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 TRIM66O15016 1216 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 CETN3O15182 167 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 STX10O60499 249 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 LRRN2O75325 713 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 AKAP3O75969 853 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 PFKLP17858 780 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 TRIM21P19474 475 aaKnown RBP18.4■□□□□ 0.54
CCNC-213ENST00000523541 PPP3CCP48454 512 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 DLG4P78352 724 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 CYP4F8P98187 520 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 ARHGAP29Q52LW3 1261 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 STXBP5Q5T5C0 1151 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 MON1AQ86VX9 555 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 FAM186BQ8IYM0 893 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 CMTM8Q8IZV2 173 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 PCED1BQ96HM7 432 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 C8orf48Q96LL4 319 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 SLC46A2Q9BY10 475 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 ELOVL4Q9GZR5 314 aa18.4■□□□□ 0.54
CCNC-213ENST00000523541 KIF9Q9HAQ2 790 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms