RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 KRT3P12035 628 aa21.95■■□□□ 1.1
SQLE-206ENST00000523430 SSR1P43307 286 aaKnown RBP21.95■■□□□ 1.1
SQLE-206ENST00000523430 RGS7P49802 495 aa21.95■■□□□ 1.1
SQLE-206ENST00000523430 CCNI2Q6ZMN8 369 aaPredicted RBP21.95■■□□□ 1.1
SQLE-206ENST00000523430 SLC13A5Q86YT5 568 aaPredicted RBP21.95■■□□□ 1.1
SQLE-206ENST00000523430 RHOT1Q8IXI2 618 aa21.95■■□□□ 1.1
SQLE-206ENST00000523430 IPO4Q8TEX9 1081 aaKnown RBP21.95■■□□□ 1.1
SQLE-206ENST00000523430 AMACRQ9UHK6 382 aa21.95■■□□□ 1.1
SQLE-206ENST00000523430 SQORQ9Y6N5 450 aa21.95■■□□□ 1.1
SQLE-206ENST00000523430 GOLGA6L10A0A0M3HER8 536 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 SIGLEC16A6NMB1 481 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 CYB561D2O14569 222 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 POMCP01189 267 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 GUCY2DQ02846 1103 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 CLUL1Q15846 466 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 CCDC142Q17RM4 750 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 ARHGAP17Q68EM7 881 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 EMC1Q8N766 993 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 PIWIL1Q96J94 861 aaKnown RBP21.94■■□□□ 1.1
SQLE-206ENST00000523430 KLHL11Q9NVR0 708 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 WDR35Q9P2L0 1181 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.94■■□□□ 1.1
SQLE-206ENST00000523430 WARSP23381 471 aaKnown RBP21.94■■□□□ 1.1
SQLE-206ENST00000523430 ADORA2BP29275 332 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 WSCD1Q658N2 575 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 PMF1Q6P1K2 205 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 FAM183BPQ6ZVS7 135 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 ECHDC2Q86YB7 292 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 CRYBG2Q8N1P7 616 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 NIPA2Q8N8Q9 360 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 LINC01599Q8WXQ3 324 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 MCRS1Q96EZ8 462 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 HERPUD2Q9BSE4 406 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 FUT8Q9BYC5 575 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 SLITRK6Q9H5Y7 841 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 GDF3Q9NR23 364 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 INPP5FQ9Y2H2 1132 aa21.94■■□□□ 1.1
SQLE-206ENST00000523430 DNM1LO00429 736 aa21.93■■□□□ 1.1
SQLE-206ENST00000523430 PSMA2P25787 234 aa21.93■■□□□ 1.1
SQLE-206ENST00000523430 ZNF268Q14587 947 aaPredicted RBP21.93■■□□□ 1.1
SQLE-206ENST00000523430 MTFR1Q15390 333 aa21.93■■□□□ 1.1
SQLE-206ENST00000523430 SIX1Q15475 284 aaPredicted RBP21.93■■□□□ 1.1
SQLE-206ENST00000523430 FAM102AQ5T9C2 384 aaPredicted RBP21.93■■□□□ 1.1
SQLE-206ENST00000523430 PRELID2Q8N945 189 aa21.93■■□□□ 1.1
SQLE-206ENST00000523430 EPB41L5Q9HCM4 733 aa21.93■■□□□ 1.1
SQLE-206ENST00000523430 HESX1Q9UBX0 185 aa21.93■■□□□ 1.1
SQLE-206ENST00000523430 ACAT1P24752 427 aaKnown RBP21.92■■□□□ 1.1
SQLE-206ENST00000523430 TNFRSF8P28908 595 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 TKTP29401 623 aaKnown RBP21.92■■□□□ 1.1
SQLE-206ENST00000523430 PDE4CQ08493 712 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 PIGHQ14442 188 aaPredicted RBP21.92■■□□□ 1.1
SQLE-206ENST00000523430 TRADDQ15628 312 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 ZNF598Q86UK7 904 aaKnown RBP21.92■■□□□ 1.1
SQLE-206ENST00000523430 KATNAL2Q8IYT4 538 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 SENP8Q96LD8 212 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 DEFB118Q96PH6 123 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 PAK6Q9NQU5 681 aaPredicted RBP21.92■■□□□ 1.1
SQLE-206ENST00000523430 TTI1O43156 1089 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 PHF2O75151 1096 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 HSPA6P17066 643 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 UPP1Q16831 310 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 TXNRD3NBQ6F5E7 133 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 RTN4RL1Q86UN2 441 aaPredicted RBP21.92■■□□□ 1.1
SQLE-206ENST00000523430 B3GALNT2Q8NCR0 500 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 SLC2A14Q8TDB8 520 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 SLC35F5Q8WV83 523 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 CASKIN2Q8WXE0 1202 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 PGBD4Q96DM1 585 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 GDAP1L1Q96MZ0 367 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 LCMT1Q9UIC8 334 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 PTPN22Q9Y2R2 807 aa21.92■■□□□ 1.1
SQLE-206ENST00000523430 TSC2P49815 1807 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 ATP2C2O75185 946 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 RARAP10276 462 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 MAP9Q49MG5 647 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 ATP13A4Q4VNC1 1196 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 LRRC8DQ7L1W4 858 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 ANKS1BQ7Z6G8 1248 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 CCDC50Q8IVM0 306 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 FAM126BQ8IXS8 530 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 AENQ8WTP8 325 aaKnown RBP21.91■■□□□ 1.1
SQLE-206ENST00000523430 PLVAPQ9BX97 442 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 RGS18Q9NS28 235 aa21.91■■□□□ 1.1
SQLE-206ENST00000523430 SPDYE4A6NLX3 237 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 GABBR2O75899 941 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 SETSIPP0DME0 302 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 SKIP12755 728 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 CARSP49589 748 aaKnown RBP21.9■■□□□ 1.1
SQLE-206ENST00000523430 CDK7P50613 346 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 GRIK3Q13003 919 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 PAN2Q504Q3 1202 aaKnown RBP21.9■■□□□ 1.1
SQLE-206ENST00000523430 KIAA0319Q5VV43 1072 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 OR6B2Q6IFH4 312 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 TRNP1Q6NT89 227 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 IFT20Q8IY31 132 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 ARFGAP1Q8N6T3 406 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 FNIP1Q8TF40 1166 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 ACSF2Q96CM8 615 aaPredicted RBP21.9■■□□□ 1.1
SQLE-206ENST00000523430 TNIP3Q96KP6 325 aa21.9■■□□□ 1.1
SQLE-206ENST00000523430 SLC4A5Q9BY07 1137 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms