RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 KIAA0895Q8NCT3 520 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 CXorf38Q8TB03 319 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 PARD3BQ8TEW8 1205 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 ELSPBP1Q96BH3 223 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 RTP3Q9BQQ7 232 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 TRPV4Q9HBA0 871 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 DDX43Q9NXZ2 648 aaKnown RBP10.93□□□□□ -0.66
TRIM35-204ENST00000521283 UXTQ9UBK9 157 aaPredicted RBP10.93□□□□□ -0.66
TRIM35-204ENST00000521283 CDH9Q9ULB4 789 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 ZNF318Q5VUA4 2279 aa10.93□□□□□ -0.66
TRIM35-204ENST00000521283 STX10O60499 249 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 NR3C1P04150 777 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 WARSP23381 471 aaKnown RBP10.92□□□□□ -0.66
TRIM35-204ENST00000521283 DDX6P26196 483 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRIM35-204ENST00000521283 TNNC1P63316 161 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 SKOR1P84550 965 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 STIM1Q13586 685 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 EDRF1Q3B7T1 1238 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 INTS6LQ5JSJ4 861 aaKnown RBP10.92□□□□□ -0.66
TRIM35-204ENST00000521283 PHLDB3Q6NSJ2 640 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 C1orf228Q6PIY5 440 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 LIMS2Q7Z4I7 341 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 ADGRF2Q8IZF7 708 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 ZSWIM2Q8NEG5 633 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 OR10T2Q8NGX3 314 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 ITFG1Q8TB96 612 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 DEPDC1BQ8WUY9 529 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 CCDC127Q96BQ5 260 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 ZNF775Q96BV0 537 aaPredicted RBP10.92□□□□□ -0.66
TRIM35-204ENST00000521283 FAXDC2Q96IV6 333 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 PGLYRP2Q96PD5 576 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 GCNAQ96QF7 691 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 MKNK1Q9BUB5 465 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 FAM124BQ9H5Z6 455 aaPredicted RBP10.92□□□□□ -0.66
TRIM35-204ENST00000521283 ZFP14Q9HCL3 533 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 TRPV5Q9NQA5 729 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 HCFC1R1Q9NWW0 138 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 CEP72Q9P209 647 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 SIX4Q9UIU6 781 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 L1RE1Q9UN81 338 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
TRIM35-204ENST00000521283 KINO60870 393 aaKnown RBP10.91□□□□□ -0.66
TRIM35-204ENST00000521283 CSH1P0DML2 217 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 CSH2P0DML3 217 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 HAPLN1P10915 354 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-204ENST00000521283 KRT13P13646 458 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 AVPR2P30518 371 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 GTF2H1P32780 548 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 PSMC2P35998 433 aaKnown RBP10.91□□□□□ -0.66
TRIM35-204ENST00000521283 MAGEA11P43364 429 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 MLLT6P55198 1093 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-204ENST00000521283 WNT7BP56706 349 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 MCCD1P59942 119 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-204ENST00000521283 PRKCQQ04759 706 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 ADAM9Q13443 819 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 SOWAHAQ2M3V2 549 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 WDR72Q3MJ13 1102 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 MGAT5BQ3V5L5 792 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 VSTM1Q6UX27 236 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 DNAJB7Q7Z6W7 309 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-204ENST00000521283 ATAD1Q8NBU5 361 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 CCDC150Q8NCX0 1101 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 ENGASEQ8NFI3 743 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 OR5B17Q8NGF7 314 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 FAM200AQ8TCP9 573 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 DNASE1L2Q92874 299 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 SMARCD2Q92925 531 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 SMARCE1Q969G3 411 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 FAM122AQ96E09 287 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 MMS19Q96T76 1030 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 NELL2Q99435 816 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 SEPT5Q99719 369 aaPredicted RBP10.91□□□□□ -0.66
TRIM35-204ENST00000521283 TSG101Q99816 390 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 IMPG2Q9BZV3 1241 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 SNX25Q9H3E2 840 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 GOLPH3LQ9H4A5 285 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 GDPD2Q9HCC8 539 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 OBP2AQ9NY56 170 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 DACH1Q9UI36 760 aa10.91□□□□□ -0.66
TRIM35-204ENST00000521283 CETN3O15182 167 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 OR4Q2P0C623 313 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 MYL4P12829 197 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 GLULP15104 373 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 PFKLP17858 780 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 RFX1P22670 979 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 NR2F2P24468 414 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 GNL1P36915 607 aaPredicted RBP10.9□□□□□ -0.66
TRIM35-204ENST00000521283 MAGEA9P43362 315 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 PPP3CCP48454 512 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 PDE6CP51160 858 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 NTHL1P78549 312 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 BIRC3Q13489 604 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.66
TRIM35-204ENST00000521283 SLC5A9Q2M3M2 681 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 ZNF667Q5HYK9 610 aa10.9□□□□□ -0.66
TRIM35-204ENST00000521283 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms