RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 NAIF1Q69YI7 327 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-217ENST00000521067 LIMS2Q7Z4I7 341 aa21.78■■□□□ 1.08
PABPC1-217ENST00000521067 TMEM86AQ8N2M4 240 aa21.78■■□□□ 1.08
PABPC1-217ENST00000521067 ABCB6Q9NP58 842 aa21.78■■□□□ 1.08
PABPC1-217ENST00000521067 POLR3BQ9NW08 1133 aaPredicted RBP21.78■■□□□ 1.08
PABPC1-217ENST00000521067 ZMYM5Q9UJ78 669 aa21.78■■□□□ 1.08
PABPC1-217ENST00000521067 TCHHQ07283 1943 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 DCDC2BA2VCK2 349 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 LMO2P25791 158 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 DDX6P26196 483 aaKnown RBP eCLIP21.77■■□□□ 1.086e-38■□□□□ 11.3
PABPC1-217ENST00000521067 NASPP49321 788 aaPredicted RBP21.77■■□□□ 1.08
PABPC1-217ENST00000521067 ALCAMQ13740 583 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 GPD1LQ8N335 351 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 TOP6BLQ8N6T0 577 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 MRPS31Q92665 395 aaKnown RBP21.77■■□□□ 1.08
PABPC1-217ENST00000521067 INTS4Q96HW7 963 aaKnown RBP21.77■■□□□ 1.08
PABPC1-217ENST00000521067 MYRFLQ96LU7 910 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 TMEM206Q9H813 350 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 INTS13Q9NVM9 706 aa21.77■■□□□ 1.08
PABPC1-217ENST00000521067 TRDMT1O14717 391 aaKnown RBP21.76■■□□□ 1.07
PABPC1-217ENST00000521067 SDHBP21912 280 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 CNR2P34972 360 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 PXNP49023 591 aaPredicted RBP21.76■■□□□ 1.07
PABPC1-217ENST00000521067 RPL10AP62906 217 aaKnown RBP21.76■■□□□ 1.07
PABPC1-217ENST00000521067 MYL7Q01449 175 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 E2F4Q16254 413 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 FAM171BQ6P995 826 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 WDR5BQ86VZ2 330 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 ADGRF2Q8IZF7 708 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 LINC00301Q8NCQ3 95 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 KBTBD7Q8WVZ9 684 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 TRMT2BQ96GJ1 504 aaKnown RBP21.76■■□□□ 1.07
PABPC1-217ENST00000521067 SEMA4GQ9NTN9 838 aa21.76■■□□□ 1.07
PABPC1-217ENST00000521067 CDV3Q9UKY7 258 aaKnown RBP21.76■■□□□ 1.07
PABPC1-217ENST00000521067 SOBPA7XYQ1 873 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 EGFP01133 1207 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 TMEM191BP0C7N4 346 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 LHX1P48742 406 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 GALK1P51570 392 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 ZNF268Q14587 947 aaPredicted RBP21.75■■□□□ 1.07
PABPC1-217ENST00000521067 CFAP221Q4G0U5 840 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 CCDC65Q8IXS2 484 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 ZSCAN16Q9H4T2 348 aaPredicted RBP21.75■■□□□ 1.07
PABPC1-217ENST00000521067 KIF9Q9HAQ2 790 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 KBTBD4Q9NVX7 518 aa21.75■■□□□ 1.07
PABPC1-217ENST00000521067 TFIP11Q9UBB9 837 aaKnown RBP21.75■■□□□ 1.07
PABPC1-217ENST00000521067 KIF26AQ9ULI4 1882 aaPredicted RBP21.75■■□□□ 1.07
PABPC1-217ENST00000521067 STX6O43752 255 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 SPATA2LQ8IUW3 424 aaPredicted RBP21.74■■□□□ 1.07
PABPC1-217ENST00000521067 SCN4BQ8IWT1 228 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 FAM160A2Q8N612 972 aaPredicted RBP21.74■■□□□ 1.07
PABPC1-217ENST00000521067 SPATA18Q8TC71 538 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 EZH1Q92800 747 aaPredicted RBP21.74■■□□□ 1.07
PABPC1-217ENST00000521067 HPDLQ96IR7 371 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 TRIM9Q9C026 710 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 TRPC7Q9HCX4 862 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 CRTAC1Q9NQ79 661 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 NME7Q9Y5B8 376 aa21.74■■□□□ 1.07
PABPC1-217ENST00000521067 ATG2BQ96BY7 2078 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 EPG5Q9HCE0 2579 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 DENND4CQ5VZ89 1909 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 C2orf78A6NCI8 922 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 ZNF233A6NK53 670 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 GDF9O60383 454 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 LRP3O75074 770 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 CST3P01034 146 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-217ENST00000521067 GJA4P35212 333 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 PSMC1P62191 440 aaKnown RBP21.73■■□□□ 1.07
PABPC1-217ENST00000521067 GRSF1Q12849 480 aaKnown RBP eCLIP21.73■■□□□ 1.07
PABPC1-217ENST00000521067 ZNF77Q15935 545 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 ANKRD36BP1Q96IX9 119 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 RTKNQ9BST9 563 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 TNMDQ9H2S6 317 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 HSPBP1Q9NZL4 362 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 GCNT4Q9P109 453 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 UXTQ9UBK9 157 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-217ENST00000521067 LAMA1P25391 3075 aa21.73■■□□□ 1.07
PABPC1-217ENST00000521067 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.72■■□□□ 1.07
PABPC1-217ENST00000521067 TGFB1I1O43294 461 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 RNF40O75150 1001 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 PDGFRBP09619 1106 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 PCSK1P29120 753 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 ZXDBP98169 803 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 FAM160A1Q05DH4 1040 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 MTF1Q14872 753 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 STK38Q15208 465 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 CSRP2Q16527 193 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 DUOXA2Q1HG44 320 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 CC2D1AQ6P1N0 951 aaPredicted RBP21.72■■□□□ 1.07
PABPC1-217ENST00000521067 PRR23CQ6ZRP0 262 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 CEP68Q76N32 757 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 EPM2AIP1Q7L775 607 aaPredicted RBP21.72■■□□□ 1.07
PABPC1-217ENST00000521067 DPH6Q7L8W6 267 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.72■■□□□ 1.07
PABPC1-217ENST00000521067 ARL14EPQ8N8R7 260 aaPredicted RBP21.72■■□□□ 1.07
PABPC1-217ENST00000521067 FUBP3Q96I24 572 aaKnown RBP eCLIP21.72■■□□□ 1.07
PABPC1-217ENST00000521067 SYT15Q9BQS2 421 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 LINC00597Q9H2U6 94 aa21.72■■□□□ 1.07
PABPC1-217ENST00000521067 ECT2Q9H8V3 914 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms