RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 BANF1O75531 89 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ELK3P41970 407 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 EMC2Q15006 297 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SGSM1Q2NKQ1 1148 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 C4orf50Q6ZRC1 276 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ZCCHC23Q6ZST2 131 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 TMPRSS6Q8IU80 811 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ACER1Q8TDN7 264 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 CYGBQ8WWM9 190 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 FSD1LQ9BXM9 530 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 MRPL1Q9BYD6 325 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ETAA1Q9NY74 926 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.08□□□□□ -1.128e-6■□□□□ 8.7
CLCN3-209ENST00000513761 APPL1Q9UKG1 709 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ARHGAP23Q9P227 1491 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 E7ENQ6 273 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 E2F6O75461 281 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 PRKCBP05771 671 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 PMLP29590 882 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 DEFB107AQ8IZN7 70 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 MPP4Q96JB8 637 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 A1CFQ9NQ94 594 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SAE1Q9UBE0 346 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SUN2Q9UH99 717 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 HERC5Q9UII4 1024 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 PAIP2BQ9ULR5 123 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 CORO1CQ9ULV4 474 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ATRNO75882 1429 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 IGSF9BQ9UPX0 1349 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SYCE1LA8MT33 242 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 MGEA5O60502 916 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 DRG2P55039 364 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 VCPP55072 806 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SPDYE2Q495Y8 402 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 MFN1Q8IWA4 741 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 FITM2Q8N6M3 262 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ETNPPLQ8TBG4 499 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 PYDC1Q8WXC3 89 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 WDR35Q9P2L0 1181 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ANGPTL3Q9Y5C1 460 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 TPST1O60507 370 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 LGR5O75473 907 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 RPS6P62753 249 aaKnown RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 ARL13BQ3SXY8 428 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SLC26A11Q86WA9 606 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 DDIASQ8IXT1 998 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 KCTD17Q8N5Z5 321 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 SKA2Q8WVK7 121 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-209ENST00000513761 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 IL1RL2Q9HB29 575 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 FAM49BQ9NUQ9 324 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 GPATCH2LQ9NWQ4 482 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 AGAP1Q9UPQ3 857 aa8.08□□□□□ -1.12
CLCN3-209ENST00000513761 NCANO14594 1321 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 TCRBV7S2A1N4TA0A589 114 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 FAAP100Q0VG06 881 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 USP10Q14694 798 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 XKR3Q5GH77 459 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ZBTB41Q5SVQ8 909 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SPC25Q9HBM1 224 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 STX18Q9P2W9 335 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 CDY2AQ9Y6F7 541 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 CDY1Q9Y6F8 540 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 A8MXQ7 604 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ZFXP17010 805 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 AP3M2P53677 418 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 CDK16Q00536 496 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 PLOD1Q02809 727 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 NPY5RQ15761 445 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 TBCCQ15814 346 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 NUP93Q8N1F7 819 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ZCCHC9Q8N567 271 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 NCLNQ969V3 563 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 PBXIP1Q96AQ6 731 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 TAAR1Q96RJ0 339 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 FAM237BA0A1B0GVD1 139 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 M0QZ92 97 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 XPOTO43592 962 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 PAMP19021 973 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 IL10P22301 178 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 PCYT1AP49585 367 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SNRPFP62306 86 aaKnown RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 CYP24A1Q07973 514 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 NSUN2Q08J23 767 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SLC45A4Q5BKX6 768 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 HHIPL2Q6UWX4 724 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ARMCX2Q7L311 632 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 EXOC8Q8IYI6 725 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 RASGEF1CQ8N431 466 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 GDPD5Q8WTR4 605 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 ADNPQ9H2P0 1102 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 RPAP3Q9H6T3 665 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-209ENST00000513761 PCDH9Q9HC56 1237 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 SAR1AQ9NR31 198 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 TBC1D23Q9NUY8 699 aa8.07□□□□□ -1.12
CLCN3-209ENST00000513761 POLLQ9UGP5 575 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms