RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 GPR88Q9GZN0 384 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 SMG9Q9H0W8 520 aaKnown RBP12.89□□□□□ -0.35
CDK7-208ENST00000512687 CRTAC1Q9NQ79 661 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 DMAC2Q9NW81 257 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 CFAP54Q96N23 3096 aa12.89□□□□□ -0.35
CDK7-208ENST00000512687 ZFHX2Q9C0A1 2572 aaPredicted RBP12.88□□□□□ -0.35
CDK7-208ENST00000512687 PRR23AA6NEV1 266 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
CDK7-208ENST00000512687 FGF19O95750 216 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 F11P03951 625 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 RPN1P04843 607 aaKnown RBP12.88□□□□□ -0.35
CDK7-208ENST00000512687 WARSP23381 471 aaKnown RBP12.88□□□□□ -0.35
CDK7-208ENST00000512687 CDC25CP30307 473 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 SYKP43405 635 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 LHX1P48742 406 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 NLRP12P59046 1061 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
CDK7-208ENST00000512687 FAM171BQ6P995 826 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 RIN3Q8TB24 985 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 ZFYVE19Q96K21 471 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 FNBP1Q96RU3 617 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 SYT15Q9BQS2 421 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 MRPL45Q9BRJ2 306 aaKnown RBP12.88□□□□□ -0.35
CDK7-208ENST00000512687 SLC46A2Q9BY10 475 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 OSBPL6Q9BZF3 934 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 XYLT2Q9H1B5 865 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 TASP1Q9H6P5 420 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
CDK7-208ENST00000512687 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
CDK7-208ENST00000512687 ZNF263O14978 683 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 EXOC3O60645 756 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 NOL4O94818 638 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 SP9P0CG40 484 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 PCSK1P29120 753 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 SOX9P48436 509 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 MYL6P60660 151 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 DLG4P78352 724 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 DPYDQ12882 1025 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 PSMD2Q13200 908 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 ARHGAP15Q53QZ3 475 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 WDR44Q5JSH3 913 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
CDK7-208ENST00000512687 ZNF852Q6ZMS4 543 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 C1orf210Q8IVY1 113 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 IRF7Q92985 503 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 CLDN23Q96B33 292 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 TRPV5Q9NQA5 729 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 NDRG2Q9UN36 371 aaKnown RBP12.87□□□□□ -0.35
CDK7-208ENST00000512687 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
CDK7-208ENST00000512687 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 R4GN57 208 aa12.87□□□□□ -0.35
CDK7-208ENST00000512687 A0A1W2PQ27 194 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 A0A1W2PQ64 194 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 SLC38A8A6NNN8 435 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 CHADO15335 359 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 RHOBTB3O94955 611 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 VNN1O95497 513 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 NR3C1P04150 777 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 PDGFRBP09619 1106 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 CSH1P0DML2 217 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 CSH2P0DML3 217 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 WEE1P30291 646 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 TAF12Q16514 161 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 CFAP221Q4G0U5 840 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 TXNDC8Q6A555 127 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 KRBA2Q6ZNG9 492 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
CDK7-208ENST00000512687 SLC9A9Q8IVB4 645 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 MAB21L3Q8N8X9 362 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 E2F7Q96AV8 911 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 FUBP3Q96I24 572 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDK7-208ENST00000512687 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 MMS19Q96T76 1030 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
CDK7-208ENST00000512687 BCO2Q9BYV7 579 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
CDK7-208ENST00000512687 DPEP3Q9H4B8 488 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 TMEM30AQ9NV96 361 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 OBP2AQ9NY56 170 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 CCL26Q9Y258 94 aa12.86□□□□□ -0.35
CDK7-208ENST00000512687 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
CDK7-208ENST00000512687 RIF1Q5UIP0 2472 aaKnown RBP12.86□□□□□ -0.35
CDK7-208ENST00000512687 RALGAPA1Q6GYQ0 2036 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 PDXKO00764 312 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 TACC1O75410 805 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 STAU1O95793 577 aaKnown RBP12.85□□□□□ -0.35
CDK7-208ENST00000512687 C4BPAP04003 597 aaKnown RBP12.85□□□□□ -0.35
CDK7-208ENST00000512687 MYL1P05976 194 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 BDNFP23560 247 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 MAGEA11P43364 429 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms